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authorMatt A. Tobin <mattatobin@localhost.localdomain>2018-02-02 04:16:08 -0500
committerMatt A. Tobin <mattatobin@localhost.localdomain>2018-02-02 04:16:08 -0500
commit5f8de423f190bbb79a62f804151bc24824fa32d8 (patch)
tree10027f336435511475e392454359edea8e25895d /python/altgraph/doc/_build
parent49ee0794b5d912db1f95dce6eb52d781dc210db5 (diff)
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@@ -0,0 +1,4 @@
+# Sphinx build info version 1
+# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
+config: 84aa655833f036f5ba0f6f2dbd1945fa
+tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/python/altgraph/doc/_build/html/_sources/changelog.txt b/python/altgraph/doc/_build/html/_sources/changelog.txt
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@@ -0,0 +1,176 @@
+Release history
+===============
+
+0.11
+----
+
+- Stabilize the order of elements in dot file exports,
+ patch from bitbucket user 'pombredanne'.
+
+- Tweak setup.py file to remove dependency on distribute (but
+ keep the dependency on setuptools)
+
+
+0.10.2
+------
+
+- There where no classifiers in the package metadata due to a bug
+ in setup.py
+
+0.10.1
+------
+
+This is a bugfix release
+
+Bug fixes:
+
+- Issue #3: The source archive contains a README.txt
+ while the setup file refers to ReadMe.txt.
+
+ This is caused by a misfeature in distutils, as a
+ workaround I've renamed ReadMe.txt to README.txt
+ in the source tree and setup file.
+
+
+0.10
+-----
+
+This is a minor feature release
+
+Features:
+
+- Do not use "2to3" to support Python 3.
+
+ As a side effect of this altgraph now supports
+ Python 2.6 and later, and no longer supports
+ earlier releases of Python.
+
+- The order of attributes in the Dot output
+ is now always alphabetical.
+
+ With this change the output will be consistent
+ between runs and Python versions.
+
+0.9
+---
+
+This is a minor bugfix release
+
+Features:
+
+- Added ``altgraph.ObjectGraph.ObjectGraph.nodes``, a method
+ yielding all nodes in an object graph.
+
+Bugfixes:
+
+- The 0.8 release didn't work with py2app when using
+ python 3.x.
+
+
+0.8
+-----
+
+This is a minor feature release. The major new feature
+is a extensive set of unittests, which explains almost
+all other changes in this release.
+
+Bugfixes:
+
+- Installing failed with Python 2.5 due to using a distutils
+ class that isn't available in that version of Python
+ (issue #1 on the issue tracker)
+
+- ``altgraph.GraphStat.degree_dist`` now actually works
+
+- ``altgraph.Graph.add_edge(a, b, create_nodes=False)`` will
+ no longer create the edge when one of the nodes doesn't
+ exist.
+
+- ``altgraph.Graph.forw_topo_sort`` failed for some sparse graphs.
+
+- ``altgraph.Graph.back_topo_sort`` was completely broken in
+ previous releases.
+
+- ``altgraph.Graph.forw_bfs_subgraph`` now actually works.
+
+- ``altgraph.Graph.back_bfs_subgraph`` now actually works.
+
+- ``altgraph.Graph.iterdfs`` now returns the correct result
+ when the ``forward`` argument is ``False``.
+
+- ``altgraph.Graph.iterdata`` now returns the correct result
+ when the ``forward`` argument is ``False``.
+
+
+Features:
+
+- The ``altgraph.Graph`` constructor now accepts an argument
+ that contains 2- and 3-tuples instead of requireing that
+ all items have the same size. The (optional) argument can now
+ also be any iterator.
+
+- ``altgraph.Graph.Graph.add_node`` has no effect when you
+ add a hidden node.
+
+- The private method ``altgraph.Graph._bfs`` is no longer
+ present.
+
+- The private method ``altgraph.Graph._dfs`` is no longer
+ present.
+
+- ``altgraph.ObjectGraph`` now has a ``__contains__`` methods,
+ which means you can use the ``in`` operator to check if a
+ node is part of a graph.
+
+- ``altgraph.GraphUtil.generate_random_graph`` will raise
+ ``GraphError`` instead of looping forever when it is
+ impossible to create the requested graph.
+
+- ``altgraph.Dot.edge_style`` raises ``GraphError`` when
+ one of the nodes is not present in the graph. The method
+ silently added the tail in the past, but without ensuring
+ a consistent graph state.
+
+- ``altgraph.Dot.save_img`` now works when the mode is
+ ``"neato"``.
+
+0.7.2
+-----
+
+This is a minor bugfix release
+
+Bugfixes:
+
+- distutils didn't include the documentation subtree
+
+0.7.1
+-----
+
+This is a minor feature release
+
+Features:
+
+- Documentation is now generated using `sphinx <http://pypi.python.org/pypi/sphinx>`_
+ and can be viewed at <http://packages.python.org/altgraph>.
+
+- The repository has moved to bitbucket
+
+- ``altgraph.GraphStat.avg_hops`` is no longer present, the function had no
+ implementation and no specified behaviour.
+
+- the module ``altgraph.compat`` is gone, which means altgraph will no
+ longer work with Python 2.3.
+
+
+0.7.0
+-----
+
+This is a minor feature release.
+
+Features:
+
+- Support for Python 3
+
+- It is now possible to run tests using 'python setup.py test'
+
+ (The actual testsuite is still very minimal though)
diff --git a/python/altgraph/doc/_build/html/_sources/core.txt b/python/altgraph/doc/_build/html/_sources/core.txt
new file mode 100644
index 000000000..8288f6a94
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_sources/core.txt
@@ -0,0 +1,26 @@
+:mod:`altgraph` --- A Python Graph Library
+==================================================
+
+.. module:: altgraph
+ :synopsis: A directional graph for python
+
+altgraph is a fork of `graphlib <http://pygraphlib.sourceforge.net>`_ tailored
+to use newer Python 2.3+ features, including additional support used by the
+py2app suite (modulegraph and macholib, specifically).
+
+altgraph is a python based graph (network) representation and manipulation package.
+It has started out as an extension to the `graph_lib module <http://www.ece.arizona.edu/~denny/python_nest/graph_lib_1.0.1.html>`_
+written by Nathan Denny it has been significantly optimized and expanded.
+
+The :class:`altgraph.Graph.Graph` class is loosely modeled after the `LEDA <http://www.algorithmic-solutions.com/enleda.htm>`_
+(Library of Efficient Datatypes) representation. The library
+includes methods for constructing graphs, BFS and DFS traversals,
+topological sort, finding connected components, shortest paths as well as a number
+graph statistics functions. The library can also visualize graphs
+via `graphviz <http://www.research.att.com/sw/tools/graphviz/>`_.
+
+
+.. exception:: GraphError
+
+ Exception raised when methods are called with bad values of
+ an inconsistent state.
diff --git a/python/altgraph/doc/_build/html/_sources/dot.txt b/python/altgraph/doc/_build/html/_sources/dot.txt
new file mode 100644
index 000000000..3848c488a
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_sources/dot.txt
@@ -0,0 +1,224 @@
+:mod:`altgraph.Dot` --- Interface to the dot language
+=====================================================
+
+.. module:: altgraph.Dot
+ :synopsis: Interface to the dot language as used by Graphviz..
+
+The :py:mod:`~altgraph.Dot` module provides a simple interface to the
+file format used in the `graphviz`_ program. The module is intended to
+offload the most tedious part of the process (the **dot** file generation)
+while transparently exposing most of its features.
+
+.. _`graphviz`: <http://www.research.att.com/sw/tools/graphviz/>`_
+
+To display the graphs or to generate image files the `graphviz`_
+package needs to be installed on the system, moreover the :command:`dot` and :command:`dotty` programs must
+be accesible in the program path so that they can be ran from processes spawned
+within the module.
+
+Example usage
+-------------
+
+Here is a typical usage::
+
+ from altgraph import Graph, Dot
+
+ # create a graph
+ edges = [ (1,2), (1,3), (3,4), (3,5), (4,5), (5,4) ]
+ graph = Graph.Graph(edges)
+
+ # create a dot representation of the graph
+ dot = Dot.Dot(graph)
+
+ # display the graph
+ dot.display()
+
+ # save the dot representation into the mydot.dot file
+ dot.save_dot(file_name='mydot.dot')
+
+ # save dot file as gif image into the graph.gif file
+ dot.save_img(file_name='graph', file_type='gif')
+
+
+Directed graph and non-directed graph
+-------------------------------------
+
+Dot class can use for both directed graph and non-directed graph
+by passing *graphtype* parameter.
+
+Example::
+
+ # create directed graph(default)
+ dot = Dot.Dot(graph, graphtype="digraph")
+
+ # create non-directed graph
+ dot = Dot.Dot(graph, graphtype="graph")
+
+
+Customizing the output
+----------------------
+
+The graph drawing process may be customized by passing
+valid :command:`dot` parameters for the nodes and edges. For a list of all
+parameters see the `graphviz`_ documentation.
+
+Example::
+
+ # customizing the way the overall graph is drawn
+ dot.style(size='10,10', rankdir='RL', page='5, 5' , ranksep=0.75)
+
+ # customizing node drawing
+ dot.node_style(1, label='BASE_NODE',shape='box', color='blue' )
+ dot.node_style(2, style='filled', fillcolor='red')
+
+ # customizing edge drawing
+ dot.edge_style(1, 2, style='dotted')
+ dot.edge_style(3, 5, arrowhead='dot', label='binds', labelangle='90')
+ dot.edge_style(4, 5, arrowsize=2, style='bold')
+
+
+ .. note::
+
+ dotty (invoked via :py:func:`~altgraph.Dot.display`) may not be able to
+ display all graphics styles. To verify the output save it to an image
+ file and look at it that way.
+
+Valid attributes
+----------------
+
+- dot styles, passed via the :py:meth:`Dot.style` method::
+
+ rankdir = 'LR' (draws the graph horizontally, left to right)
+ ranksep = number (rank separation in inches)
+
+- node attributes, passed via the :py:meth:`Dot.node_style` method::
+
+ style = 'filled' | 'invisible' | 'diagonals' | 'rounded'
+ shape = 'box' | 'ellipse' | 'circle' | 'point' | 'triangle'
+
+- edge attributes, passed via the :py:meth:`Dot.edge_style` method::
+
+ style = 'dashed' | 'dotted' | 'solid' | 'invis' | 'bold'
+ arrowhead = 'box' | 'crow' | 'diamond' | 'dot' | 'inv' | 'none' | 'tee' | 'vee'
+ weight = number (the larger the number the closer the nodes will be)
+
+- valid `graphviz colors <http://www.research.att.com/~erg/graphviz/info/colors.html>`_
+
+- for more details on how to control the graph drawing process see the
+ `graphviz reference <http://www.research.att.com/sw/tools/graphviz/refs.html>`_.
+
+
+Class interface
+---------------
+
+.. class:: Dot(graph[, nodes[, edgefn[, nodevisitor[, edgevisitor[, name[, dot[, dotty[, neato[, graphtype]]]]]]]]])
+
+ Creates a new Dot generator based on the specified
+ :class:`Graph <altgraph.Graph.Graph>`. The Dot generator won't reference
+ the *graph* once it is constructed.
+
+ If the *nodes* argument is present it is the list of nodes to include
+ in the graph, otherwise all nodes in *graph* are included.
+
+ If the *edgefn* argument is present it is a function that yields the
+ nodes connected to another node, this defaults to
+ :meth:`graph.out_nbr <altgraph.Graph.Graph.out_nbr>`. The constructor won't
+ add edges to the dot file unless both the head and tail of the edge
+ are in *nodes*.
+
+ If the *name* is present it specifies the name of the graph in the resulting
+ dot file. The default is ``"G"``.
+
+ The functions *nodevisitor* and *edgevisitor* return the default style
+ for a given edge or node (both default to functions that return an empty
+ style).
+
+ The arguments *dot*, *dotty* and *neato* are used to pass the path to
+ the corresponding `graphviz`_ command.
+
+
+Updating graph attributes
+.........................
+
+.. method:: Dot.style(\**attr)
+
+ Sets the overall style (graph attributes) to the given attributes.
+
+ See `Valid Attributes`_ for more information about the attributes.
+
+.. method:: Dot.node_style(node, \**attr)
+
+ Sets the style for *node* to the given attributes.
+
+ This method will add *node* to the graph when it isn't already
+ present.
+
+ See `Valid Attributes`_ for more information about the attributes.
+
+.. method:: Dot.all_node_style(\**attr)
+
+ Replaces the current style for all nodes
+
+
+.. method:: edge_style(head, tail, \**attr)
+
+ Sets the style of an edge to the given attributes. The edge will
+ be added to the graph when it isn't already present, but *head*
+ and *tail* must both be valid nodes.
+
+ See `Valid Attributes`_ for more information about the attributes.
+
+
+
+Emitting output
+...............
+
+.. method:: Dot.display([mode])
+
+ Displays the current graph via dotty.
+
+ If the *mode* is ``"neato"`` the dot file is processed with
+ the neato command before displaying.
+
+ This method won't return until the dotty command exits.
+
+.. method:: save_dot(filename)
+
+ Saves the current graph representation into the given file.
+
+ .. note::
+
+ For backward compatibility reasons this method can also
+ be called without an argument, it will then write the graph
+ into a fixed filename (present in the attribute :data:`Graph.temp_dot`).
+
+ This feature is deprecated and should not be used.
+
+
+.. method:: save_image(file_name[, file_type[, mode]])
+
+ Saves the current graph representation as an image file. The output
+ is written into a file whose basename is *file_name* and whose suffix
+ is *file_type*.
+
+ The *file_type* specifies the type of file to write, the default
+ is ``"gif"``.
+
+ If the *mode* is ``"neato"`` the dot file is processed with
+ the neato command before displaying.
+
+ .. note::
+
+ For backward compatibility reasons this method can also
+ be called without an argument, it will then write the graph
+ with a fixed basename (``"out"``).
+
+ This feature is deprecated and should not be used.
+
+.. method:: iterdot()
+
+ Yields all lines of a `graphviz`_ input file (including line endings).
+
+.. method:: __iter__()
+
+ Alias for the :meth:`iterdot` method.
diff --git a/python/altgraph/doc/_build/html/_sources/graph.txt b/python/altgraph/doc/_build/html/_sources/graph.txt
new file mode 100644
index 000000000..72e36bbc1
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_sources/graph.txt
@@ -0,0 +1,299 @@
+:mod:`altgraph.Graph` --- Basic directional graphs
+==================================================
+
+.. module:: altgraph.Graph
+ :synopsis: Basic directional graphs.
+
+The module :mod:`altgraph.Graph` provides a class :class:`Graph` that
+represents a directed graph with *N* nodes and *E* edges.
+
+.. class:: Graph([edges])
+
+ Constructs a new empty :class:`Graph` object. If the optional
+ *edges* parameter is supplied, updates the graph by adding the
+ specified edges.
+
+ All of the elements in *edges* should be tuples with two or three
+ elements. The first two elements of the tuple are the source and
+ destination node of the edge, the optional third element is the
+ edge data. The source and destination nodes are added to the graph
+ when the aren't already present.
+
+
+Node related methods
+--------------------
+
+.. method:: Graph.add_node(node[, node_data])
+
+ Adds a new node to the graph if it is not already present. The new
+ node must be a hashable object.
+
+ Arbitrary data can be attached to the node via the optional *node_data*
+ argument.
+
+ .. note:: the node also won't be added to the graph when it is
+ present but currently hidden.
+
+
+.. method:: Graph.hide_node(node)
+
+ Hides a *node* from the graph. The incoming and outgoing edges of
+ the node will also be hidden.
+
+ Raises :class:`altgraph.GraphError` when the node is not (visible)
+ node of the graph.
+
+
+.. method:: Graph.restore_node(node)
+
+ Restores a previously hidden *node*. The incoming and outgoing
+ edges of the node are also restored.
+
+ Raises :class:`altgraph.GraphError` when the node is not a hidden
+ node of the graph.
+
+.. method:: Graph.restore_all_nodes()
+
+ Restores all hidden nodes.
+
+.. method:: Graph.number_of_nodes()
+
+ Return the number of visible nodes in the graph.
+
+.. method:: Graph.number_of_hidden_nodes()
+
+ Return the number of hidden nodes in the graph.
+
+.. method:: Graph.node_list()
+
+ Return a list with all visible nodes in the graph.
+
+.. method:: Graph.hidden_node_list()
+
+ Return a list with all hidden nodes in the graph.
+
+.. method:: node_data(node)
+
+ Return the data associated with the *node* when it was
+ added.
+
+.. method:: Graph.describe_node(node)
+
+ Returns *node*, the node's data and the lists of outgoing
+ and incoming edges for the node.
+
+ .. note::
+
+ the edge lists should not be modified, doing so
+ can result in unpredicatable behavior.
+
+.. method:: Graph.__contains__(node)
+
+ Returns True iff *node* is a node in the graph. This
+ method is accessed through the *in* operator.
+
+.. method:: Graph.__iter__()
+
+ Yield all nodes in the graph.
+
+.. method:: Graph.out_edges(node)
+
+ Return the list of outgoing edges for *node*
+
+.. method:: Graph.inc_edges(node)
+
+ Return the list of incoming edges for *node*
+
+.. method:: Graph.all_edges(node)
+
+ Return the list of incoming and outgoing edges for *node*
+
+.. method:: Graph.out_degree(node)
+
+ Return the number of outgoing edges for *node*.
+
+.. method:: Graph.inc_degree(node)
+
+ Return the number of incoming edges for *node*.
+
+.. method:: Graph.all_degree(node)
+
+ Return the number of edges (incoming or outgoing) for *node*.
+
+Edge related methods
+--------------------
+
+.. method:: Graph.add_edge(head_id, tail_id [, edge data [, create_nodes]])
+
+ Adds a directed edge from *head_id* to *tail_id*. Arbitrary data can
+ be added via *edge_data*. When *create_nodes* is *True* (the default),
+ *head_id* and *tail_id* will be added to the graph when the aren't
+ already present.
+
+.. method:: Graph.hide_edge(edge)
+
+ Hides an edge from the graph. The edge may be unhidden at some later
+ time.
+
+.. method:: Graph.restore_edge(edge)
+
+ Restores a previously hidden *edge*.
+
+.. method:: Graph.restore_all_edges()
+
+ Restore all edges that were hidden before, except for edges
+ referring to hidden nodes.
+
+.. method:: Graph.edge_by_node(head, tail)
+
+ Return the edge ID for an edge from *head* to *tail*,
+ or :data:`None` when no such edge exists.
+
+.. method:: Graph.edge_by_id(edge)
+
+ Return the head and tail of the *edge*
+
+.. method:: Graph.edge_data(edge)
+
+ Return the data associated with the *edge*.
+
+
+.. method:: Graph.head(edge)
+
+ Return the head of an *edge*
+
+.. method:: Graph.tail(edge)
+
+ Return the tail of an *edge*
+
+.. method:: Graph.describe_edge(edge)
+
+ Return the *edge*, the associated data, its head and tail.
+
+.. method:: Graph.number_of_edges()
+
+ Return the number of visible edges.
+
+.. method:: Graph.number_of_hidden_edges()
+
+ Return the number of hidden edges.
+
+.. method:: Graph.edge_list()
+
+ Returns a list with all visible edges in the graph.
+
+.. method:: Graph.hidden_edge_list()
+
+ Returns a list with all hidden edges in the graph.
+
+Graph traversal
+---------------
+
+.. method:: Graph.out_nbrs(node)
+
+ Return a list of all nodes connected by outgoing edges.
+
+.. method:: Graph.inc_nbrs(node)
+
+ Return a list of all nodes connected by incoming edges.
+
+.. method:: Graph.all_nbrs(node)
+
+ Returns a list of nodes connected by an incoming or outgoing edge.
+
+.. method:: Graph.forw_topo_sort()
+
+ Return a list of nodes where the successors (based on outgoing
+ edges) of any given node apear in the sequence after that node.
+
+.. method:: Graph.back_topo_sort()
+
+ Return a list of nodes where the successors (based on incoming
+ edges) of any given node apear in the sequence after that node.
+
+.. method:: Graph.forw_bfs_subgraph(start_id)
+
+ Return a subgraph consisting of the breadth first
+ reachable nodes from *start_id* based on their outgoing edges.
+
+
+.. method:: Graph.back_bfs_subgraph(start_id)
+
+ Return a subgraph consisting of the breadth first
+ reachable nodes from *start_id* based on their incoming edges.
+
+.. method:: Graph.iterdfs(start[, end[, forward]])
+
+ Yield nodes in a depth first traversal starting at the *start*
+ node.
+
+ If *end* is specified traversal stops when reaching that node.
+
+ If forward is True (the default) edges are traversed in forward
+ direction, otherwise they are traversed in reverse direction.
+
+.. method:: Graph.iterdata(start[, end[, forward[, condition]]])
+
+ Yield the associated data for nodes in a depth first traversal
+ starting at the *start* node. This method will not yield values for nodes
+ without associated data.
+
+ If *end* is specified traversal stops when reaching that node.
+
+ If *condition* is specified and the condition callable returns
+ False for the associated data this method will not yield the
+ associated data and will not follow the edges for the node.
+
+ If forward is True (the default) edges are traversed in forward
+ direction, otherwise they are traversed in reverse direction.
+
+.. method:: Graph.forw_bfs(start[, end])
+
+ Returns a list of nodes starting at *start* in some bread first
+ search order (following outgoing edges).
+
+ When *end* is specified iteration stops at that node.
+
+.. method:: Graph.back_bfs(start[, end])
+
+ Returns a list of nodes starting at *start* in some bread first
+ search order (following incoming edges).
+
+ When *end* is specified iteration stops at that node.
+
+.. method:: Graph.get_hops(start[, end[, forward]])
+
+ Computes the hop distance to all nodes centered around a specified node.
+
+ First order neighbours are at hop 1, their neigbours are at hop 2 etc.
+ Uses :py:meth:`forw_bfs` or :py:meth:`back_bfs` depending on the value of
+ the forward parameter.
+
+ If the distance between all neighbouring nodes is 1 the hop number
+ corresponds to the shortest distance between the nodes.
+
+ Typical usage::
+
+ >>> print graph.get_hops(1, 8)
+ >>> [(1, 0), (2, 1), (3, 1), (4, 2), (5, 3), (7, 4), (8, 5)]
+ # node 1 is at 0 hops
+ # node 2 is at 1 hop
+ # ...
+ # node 8 is at 5 hops
+
+
+Graph statistics
+----------------
+
+.. method:: Graph.connected()
+
+ Returns True iff every node in the graph can be reached from
+ every other node.
+
+.. method:: Graph.clust_coef(node)
+
+ Returns the local clustering coefficient of node.
+
+ The local cluster coefficient is the proportion of the actual number
+ of edges between neighbours of node and the maximum number of
+ edges between those nodes.
diff --git a/python/altgraph/doc/_build/html/_sources/graphalgo.txt b/python/altgraph/doc/_build/html/_sources/graphalgo.txt
new file mode 100644
index 000000000..84d492f44
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_sources/graphalgo.txt
@@ -0,0 +1,26 @@
+:mod:`altgraph.GraphAlgo` --- Graph algorithms
+==================================================
+
+.. module:: altgraph.GraphAlgo
+ :synopsis: Basic graphs algoritms
+
+.. function:: dijkstra(graph, start[, end])
+
+ Dijkstra's algorithm for shortest paths.
+
+ Find shortest paths from the start node to all nodes nearer
+ than or equal to the *end* node. The edge data is assumed to be the edge length.
+
+ .. note::
+
+ Dijkstra's algorithm is only guaranteed to work correctly when all edge lengths are positive.
+ This code does not verify this property for all edges (only the edges examined until the end
+ vertex is reached), but will correctly compute shortest paths even for some graphs with negative
+ edges, and will raise an exception if it discovers that a negative edge has caused it to make a mistake.
+
+
+.. function:: shortest_path(graph, start, end)
+
+ Find a single shortest path from the given start node to the given end node.
+ The input has the same conventions as :func:`dijkstra`. The output is a list
+ of the nodes in order along the shortest path.
diff --git a/python/altgraph/doc/_build/html/_sources/graphstat.txt b/python/altgraph/doc/_build/html/_sources/graphstat.txt
new file mode 100644
index 000000000..0931a12dd
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_sources/graphstat.txt
@@ -0,0 +1,25 @@
+:mod:`altgraph.GraphStat` --- Functions providing various graph statistics
+==========================================================================
+
+.. module:: altgraph.GraphStat
+ :synopsis: Functions providing various graph statistics
+
+The module :mod:`altgraph.GraphStat` provides function that calculate
+graph statistics. Currently there is only one such function, more may
+be added later.
+
+.. function:: degree_dist(graph[, limits[, bin_num[, mode]]])
+
+ Groups the number of edges per node into *bin_num* bins
+ and returns the list of those bins. Every item in the result
+ is a tuple with the center of the bin and the number of items
+ in that bin.
+
+ When the *limits* argument is present it must be a tuple with
+ the mininum and maximum number of edges that get binned (that
+ is, when *limits* is ``(4, 10)`` only nodes with between 4
+ and 10 edges get counted.
+
+ The *mode* argument is used to count incoming (``'inc'``) or
+ outgoing (``'out'``) edges. The default is to count the outgoing
+ edges.
diff --git a/python/altgraph/doc/_build/html/_sources/graphutil.txt b/python/altgraph/doc/_build/html/_sources/graphutil.txt
new file mode 100644
index 000000000..c07836df8
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_sources/graphutil.txt
@@ -0,0 +1,55 @@
+:mod:`altgraph.GraphUtil` --- Utility functions
+================================================
+
+.. module:: altgraph.GraphUtil
+ :synopsis: Utility functions
+
+The module :mod:`altgraph.GraphUtil` performs a number of more
+or less useful utility functions.
+
+.. function:: generate_random_graph(node_num, edge_num[, self_loops[, multi_edges])
+
+ Generates and returns a :class:`Graph <altgraph.Graph.Graph>` instance
+ with *node_num* nodes randomly connected by *edge_num* edges.
+
+ When *self_loops* is present and True there can be edges that point from
+ a node to itself.
+
+ When *multi_edge* is present and True there can be duplicate edges.
+
+ This method raises :class:`GraphError <altgraph.GraphError` when
+ a graph with the requested configuration cannot be created.
+
+.. function:: generate_scale_free_graph(steps, growth_num[, self_loops[, multi_edges]])
+
+ Generates and returns a :py:class:`~altgraph.Graph.Graph` instance that
+ will have *steps*growth_n um* nodes and a scale free (powerlaw)
+ connectivity.
+
+ Starting with a fully connected graph with *growth_num* nodes
+ at every step *growth_num* nodes are added to the graph and are connected
+ to existing nodes with a probability proportional to the degree of these
+ existing nodes.
+
+ .. warning:: The current implementation is basically untested, although
+ code inspection seems to indicate an implementation that is consistent
+ with the description at
+ `Wolfram MathWorld <http://mathworld.wolfram.com/Scale-FreeNetwork.html>`_
+
+.. function:: filter_stack(graph, head, filters)
+
+ Perform a depth-first oder walk of the graph starting at *head* and
+ apply all filter functions in *filters* on the node data of the nodes
+ found.
+
+ Returns (*visited*, *removes*, *orphans*), where
+
+ * *visited*: the set of visited nodes
+
+ * *removes*: the list of nodes where the node data doesn't match
+ all *filters*.
+
+ * *orphans*: list of tuples (*last_good*, *node*), where
+ node is not in *removes* and one of the nodes that is connected
+ by an incoming edge is in *removes*. *Last_good* is the
+ closest upstream node that is not in *removes*.
diff --git a/python/altgraph/doc/_build/html/_sources/index.txt b/python/altgraph/doc/_build/html/_sources/index.txt
new file mode 100644
index 000000000..1e8d504ed
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_sources/index.txt
@@ -0,0 +1,41 @@
+.. altgraph documentation master file, created by
+ sphinx-quickstart on Tue Aug 31 11:04:49 2010.
+ You can adapt this file completely to your liking, but it should at least
+ contain the root `toctree` directive.
+
+Altgraph - A basic graph library
+================================
+
+altgraph is a fork of graphlib: a graph (network) package for constructing
+graphs, BFS and DFS traversals, topological sort, shortest paths, etc. with
+graphviz output.
+
+The primary users of this package are `macholib <http://pypi.python.org/pypi/macholib>`_ and `modulegraph <http://pypi.python.org/pypi/modulegraph>`_.
+
+.. toctree::
+ :maxdepth: 1
+
+ changelog
+ license
+ core
+ graph
+ objectgraph
+ graphalgo
+ graphstat
+ graphutil
+ dot
+
+Online Resources
+----------------
+
+* `Sourcecode repository on bitbucket <http://bitbucket.org/ronaldoussoren/altgraph/>`_
+
+* `The issue tracker <http://bitbucket.org/ronaldoussoren/altgraph/issues>`_
+
+Indices and tables
+------------------
+
+* :ref:`genindex`
+* :ref:`modindex`
+* :ref:`search`
+
diff --git a/python/altgraph/doc/_build/html/_sources/license.txt b/python/altgraph/doc/_build/html/_sources/license.txt
new file mode 100644
index 000000000..498e60be0
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_sources/license.txt
@@ -0,0 +1,25 @@
+License
+=======
+
+Copyright (c) 2004 Istvan Albert unless otherwise noted.
+
+Parts are copyright (c) Bob Ippolito
+
+Parts are copyright (c) 2010-2014 Ronald Oussoren
+
+MIT License
+...........
+
+Permission is hereby granted, free of charge, to any person obtaining a copy of this software
+and associated documentation files (the "Software"), to deal in the Software without restriction,
+including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense,
+and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do
+so.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED,
+INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR
+PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE
+FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE,
+ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+THE SOFTWARE.
+
diff --git a/python/altgraph/doc/_build/html/_sources/objectgraph.txt b/python/altgraph/doc/_build/html/_sources/objectgraph.txt
new file mode 100644
index 000000000..87485255f
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_sources/objectgraph.txt
@@ -0,0 +1,134 @@
+:mod:`altgraph.ObjectGraph` --- Graphs of objecs with an identifier
+===================================================================
+
+.. module:: altgraph.ObjectGraph
+ :synopsis: A graph of objects that have a "graphident" attribute.
+
+.. class:: ObjectGraph([graph[, debug]])
+
+ A graph of objects that have a "graphident" attribute. The
+ value of this attribute is the key for the object in the
+ graph.
+
+ The optional *graph* is a previously constructed
+ :class:`Graph <altgraph.Graph.Graph>`.
+
+ The optional *debug* level controls the amount of debug output
+ (see :meth:`msg`, :meth:`msgin` and :meth:`msgout`).
+
+ .. note:: the altgraph library does not generate output, the
+ debug attribute and message methods are present for use
+ by subclasses.
+
+.. data:: ObjectGraph.graph
+
+ An :class:`Graph <altgraph.Graph.Graph>` object that contains
+ the graph data.
+
+
+.. method:: ObjectGraph.addNode(node)
+
+ Adds a *node* to the graph.
+
+ .. note:: re-adding a node that was previously removed
+ using :meth:`removeNode` will reinstate the previously
+ removed node.
+
+.. method:: ObjectGraph.createNode(self, cls, name, \*args, \**kwds)
+
+ Creates a new node using ``cls(*args, **kwds)`` and adds that
+ node using :meth:`addNode`.
+
+ Returns the newly created node.
+
+.. method:: ObjectGraph.removeNode(node)
+
+ Removes a *node* from the graph when it exists. The *node* argument
+ is either a node object, or the graphident of a node.
+
+.. method:: ObjectGraph.createReferences(fromnode, tonode[, edge_data])
+
+ Creates a reference from *fromnode* to *tonode*. The optional
+ *edge_data* is associated with the edge.
+
+ *Fromnode* and *tonode* can either be node objects or the graphident
+ values for nodes.
+
+.. method:: removeReference(fromnode, tonode)
+
+ Removes the reference from *fromnode* to *tonode* if it exists.
+
+.. method:: ObjectGraph.getRawIdent(node)
+
+ Returns the *graphident* attribute of *node*, or the graph itself
+ when *node* is :data:`None`.
+
+.. method:: getIdent(node)
+
+ Same as :meth:`getRawIdent`, but only if the node is part
+ of the graph.
+
+ *Node* can either be an actual node object or the graphident of
+ a node.
+
+.. method:: ObjectGraph.findNode(node)
+
+ Returns a given node in the graph, or :data:`Node` when it cannot
+ be found.
+
+ *Node* is either an object with a *graphident* attribute or
+ the *graphident* attribute itself.
+
+.. method:: ObjectGraph.__contains__(node)
+
+ Returns True if *node* is a member of the graph. *Node* is either an
+ object with a *graphident* attribute or the *graphident* attribute itself.
+
+.. method:: ObjectGraph.flatten([condition[, start]])
+
+ Yield all nodes that are entirely reachable by *condition*
+ starting fromt he given *start* node or the graph root.
+
+ .. note:: objects are only reachable from the graph root
+ when there is a reference from the root to the node
+ (either directly or through another node)
+
+.. method:: ObjectGraph.nodes()
+
+ Yield all nodes in the graph.
+
+.. method:: ObjectGraph.get_edges(node)
+
+ Returns two iterators that yield the nodes reaching by
+ outgoing and incoming edges.
+
+.. method:: ObjectGraph.filterStack(filters)
+
+ Filter the ObjectGraph in-place by removing all edges to nodes that
+ do not match every filter in the given filter list
+
+ Returns a tuple containing the number of:
+ (*nodes_visited*, *nodes_removed*, *nodes_orphaned*)
+
+
+Debug output
+------------
+
+.. data:: ObjectGraph.debug
+
+ The current debug level.
+
+.. method:: ObjectGraph.msg(level, text, \*args)
+
+ Print a debug message at the current indentation level when the current
+ debug level is *level* or less.
+
+.. method:: ObjectGraph.msgin(level, text, \*args)
+
+ Print a debug message when the current debug level is *level* or less,
+ and increase the indentation level.
+
+.. method:: ObjectGraph.msgout(level, text, \*args)
+
+ Decrease the indentation level and print a debug message when the
+ current debug level is *level* or less.
diff --git a/python/altgraph/doc/_build/html/_static/ajax-loader.gif b/python/altgraph/doc/_build/html/_static/ajax-loader.gif
new file mode 100644
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--- /dev/null
+++ b/python/altgraph/doc/_build/html/_static/ajax-loader.gif
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diff --git a/python/altgraph/doc/_build/html/_static/basic.css b/python/altgraph/doc/_build/html/_static/basic.css
new file mode 100644
index 000000000..c959cf0db
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_static/basic.css
@@ -0,0 +1,537 @@
+/*
+ * basic.css
+ * ~~~~~~~~~
+ *
+ * Sphinx stylesheet -- basic theme.
+ *
+ * :copyright: Copyright 2007-2013 by the Sphinx team, see AUTHORS.
+ * :license: BSD, see LICENSE for details.
+ *
+ */
+
+/* -- main layout ----------------------------------------------------------- */
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+div.clearer {
+ clear: both;
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+/* -- relbar ---------------------------------------------------------------- */
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+ width: 100%;
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+ float: left;
+ width: 230px;
+ margin-left: -100%;
+ font-size: 90%;
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+ width: 30px;
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+
+img {
+ border: 0;
+ max-width: 100%;
+}
+
+/* -- search page ----------------------------------------------------------- */
+
+ul.search {
+ margin: 10px 0 0 20px;
+ padding: 0;
+}
+
+ul.search li {
+ padding: 5px 0 5px 20px;
+ background-image: url(file.png);
+ background-repeat: no-repeat;
+ background-position: 0 7px;
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+
+ul.search li a {
+ font-weight: bold;
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+ margin: 2px 0 0 30px;
+ text-align: left;
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+
+ul.keywordmatches li.goodmatch a {
+ font-weight: bold;
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+
+/* -- index page ------------------------------------------------------------ */
+
+table.contentstable {
+ width: 90%;
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+
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+ font-style: italic;
+ padding-top: 5px;
+ font-size: 90%;
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+
+/* -- general index --------------------------------------------------------- */
+
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+ width: 100%;
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+ vertical-align: top;
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+ border-bottom: 1px solid #ddd;
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+ padding: 0.4em;
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+ border-bottom: 1px solid #ddd;
+ margin: 1em 0 1em 0;
+ padding: 0.4em;
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+
+/* -- general body styles --------------------------------------------------- */
+
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+ visibility: hidden;
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+
+h1:hover > a.headerlink,
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+
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+ text-align: inherit;
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+
+div.body td {
+ text-align: left;
+}
+
+.field-list ul {
+ padding-left: 1em;
+}
+
+.first {
+ margin-top: 0 !important;
+}
+
+p.rubric {
+ margin-top: 30px;
+ font-weight: bold;
+}
+
+img.align-left, .figure.align-left, object.align-left {
+ clear: left;
+ float: left;
+ margin-right: 1em;
+}
+
+img.align-right, .figure.align-right, object.align-right {
+ clear: right;
+ float: right;
+ margin-left: 1em;
+}
+
+img.align-center, .figure.align-center, object.align-center {
+ display: block;
+ margin-left: auto;
+ margin-right: auto;
+}
+
+.align-left {
+ text-align: left;
+}
+
+.align-center {
+ text-align: center;
+}
+
+.align-right {
+ text-align: right;
+}
+
+/* -- sidebars -------------------------------------------------------------- */
+
+div.sidebar {
+ margin: 0 0 0.5em 1em;
+ border: 1px solid #ddb;
+ padding: 7px 7px 0 7px;
+ background-color: #ffe;
+ width: 40%;
+ float: right;
+}
+
+p.sidebar-title {
+ font-weight: bold;
+}
+
+/* -- topics ---------------------------------------------------------------- */
+
+div.topic {
+ border: 1px solid #ccc;
+ padding: 7px 7px 0 7px;
+ margin: 10px 0 10px 0;
+}
+
+p.topic-title {
+ font-size: 1.1em;
+ font-weight: bold;
+ margin-top: 10px;
+}
+
+/* -- admonitions ----------------------------------------------------------- */
+
+div.admonition {
+ margin-top: 10px;
+ margin-bottom: 10px;
+ padding: 7px;
+}
+
+div.admonition dt {
+ font-weight: bold;
+}
+
+div.admonition dl {
+ margin-bottom: 0;
+}
+
+p.admonition-title {
+ margin: 0px 10px 5px 0px;
+ font-weight: bold;
+}
+
+div.body p.centered {
+ text-align: center;
+ margin-top: 25px;
+}
+
+/* -- tables ---------------------------------------------------------------- */
+
+table.docutils {
+ border: 0;
+ border-collapse: collapse;
+}
+
+table.docutils td, table.docutils th {
+ padding: 1px 8px 1px 5px;
+ border-top: 0;
+ border-left: 0;
+ border-right: 0;
+ border-bottom: 1px solid #aaa;
+}
+
+table.field-list td, table.field-list th {
+ border: 0 !important;
+}
+
+table.footnote td, table.footnote th {
+ border: 0 !important;
+}
+
+th {
+ text-align: left;
+ padding-right: 5px;
+}
+
+table.citation {
+ border-left: solid 1px gray;
+ margin-left: 1px;
+}
+
+table.citation td {
+ border-bottom: none;
+}
+
+/* -- other body styles ----------------------------------------------------- */
+
+ol.arabic {
+ list-style: decimal;
+}
+
+ol.loweralpha {
+ list-style: lower-alpha;
+}
+
+ol.upperalpha {
+ list-style: upper-alpha;
+}
+
+ol.lowerroman {
+ list-style: lower-roman;
+}
+
+ol.upperroman {
+ list-style: upper-roman;
+}
+
+dl {
+ margin-bottom: 15px;
+}
+
+dd p {
+ margin-top: 0px;
+}
+
+dd ul, dd table {
+ margin-bottom: 10px;
+}
+
+dd {
+ margin-top: 3px;
+ margin-bottom: 10px;
+ margin-left: 30px;
+}
+
+dt:target, .highlighted {
+ background-color: #fbe54e;
+}
+
+dl.glossary dt {
+ font-weight: bold;
+ font-size: 1.1em;
+}
+
+.field-list ul {
+ margin: 0;
+ padding-left: 1em;
+}
+
+.field-list p {
+ margin: 0;
+}
+
+.optional {
+ font-size: 1.3em;
+}
+
+.versionmodified {
+ font-style: italic;
+}
+
+.system-message {
+ background-color: #fda;
+ padding: 5px;
+ border: 3px solid red;
+}
+
+.footnote:target {
+ background-color: #ffa;
+}
+
+.line-block {
+ display: block;
+ margin-top: 1em;
+ margin-bottom: 1em;
+}
+
+.line-block .line-block {
+ margin-top: 0;
+ margin-bottom: 0;
+ margin-left: 1.5em;
+}
+
+.guilabel, .menuselection {
+ font-family: sans-serif;
+}
+
+.accelerator {
+ text-decoration: underline;
+}
+
+.classifier {
+ font-style: oblique;
+}
+
+abbr, acronym {
+ border-bottom: dotted 1px;
+ cursor: help;
+}
+
+/* -- code displays --------------------------------------------------------- */
+
+pre {
+ overflow: auto;
+ overflow-y: hidden; /* fixes display issues on Chrome browsers */
+}
+
+td.linenos pre {
+ padding: 5px 0px;
+ border: 0;
+ background-color: transparent;
+ color: #aaa;
+}
+
+table.highlighttable {
+ margin-left: 0.5em;
+}
+
+table.highlighttable td {
+ padding: 0 0.5em 0 0.5em;
+}
+
+tt.descname {
+ background-color: transparent;
+ font-weight: bold;
+ font-size: 1.2em;
+}
+
+tt.descclassname {
+ background-color: transparent;
+}
+
+tt.xref, a tt {
+ background-color: transparent;
+ font-weight: bold;
+}
+
+h1 tt, h2 tt, h3 tt, h4 tt, h5 tt, h6 tt {
+ background-color: transparent;
+}
+
+.viewcode-link {
+ float: right;
+}
+
+.viewcode-back {
+ float: right;
+ font-family: sans-serif;
+}
+
+div.viewcode-block:target {
+ margin: -1px -10px;
+ padding: 0 10px;
+}
+
+/* -- math display ---------------------------------------------------------- */
+
+img.math {
+ vertical-align: middle;
+}
+
+div.body div.math p {
+ text-align: center;
+}
+
+span.eqno {
+ float: right;
+}
+
+/* -- printout stylesheet --------------------------------------------------- */
+
+@media print {
+ div.document,
+ div.documentwrapper,
+ div.bodywrapper {
+ margin: 0 !important;
+ width: 100%;
+ }
+
+ div.sphinxsidebar,
+ div.related,
+ div.footer,
+ #top-link {
+ display: none;
+ }
+} \ No newline at end of file
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new file mode 100644
index 000000000..551517b8c
--- /dev/null
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Binary files differ
diff --git a/python/altgraph/doc/_build/html/_static/comment-close.png b/python/altgraph/doc/_build/html/_static/comment-close.png
new file mode 100644
index 000000000..09b54be46
--- /dev/null
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Binary files differ
diff --git a/python/altgraph/doc/_build/html/_static/comment.png b/python/altgraph/doc/_build/html/_static/comment.png
new file mode 100644
index 000000000..92feb52b8
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diff --git a/python/altgraph/doc/_build/html/_static/doctools.js b/python/altgraph/doc/_build/html/_static/doctools.js
new file mode 100644
index 000000000..2036e5f5f
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_static/doctools.js
@@ -0,0 +1,238 @@
+/*
+ * doctools.js
+ * ~~~~~~~~~~~
+ *
+ * Sphinx JavaScript utilities for all documentation.
+ *
+ * :copyright: Copyright 2007-2013 by the Sphinx team, see AUTHORS.
+ * :license: BSD, see LICENSE for details.
+ *
+ */
+
+/**
+ * select a different prefix for underscore
+ */
+$u = _.noConflict();
+
+/**
+ * make the code below compatible with browsers without
+ * an installed firebug like debugger
+if (!window.console || !console.firebug) {
+ var names = ["log", "debug", "info", "warn", "error", "assert", "dir",
+ "dirxml", "group", "groupEnd", "time", "timeEnd", "count", "trace",
+ "profile", "profileEnd"];
+ window.console = {};
+ for (var i = 0; i < names.length; ++i)
+ window.console[names[i]] = function() {};
+}
+ */
+
+/**
+ * small helper function to urldecode strings
+ */
+jQuery.urldecode = function(x) {
+ return decodeURIComponent(x).replace(/\+/g, ' ');
+};
+
+/**
+ * small helper function to urlencode strings
+ */
+jQuery.urlencode = encodeURIComponent;
+
+/**
+ * This function returns the parsed url parameters of the
+ * current request. Multiple values per key are supported,
+ * it will always return arrays of strings for the value parts.
+ */
+jQuery.getQueryParameters = function(s) {
+ if (typeof s == 'undefined')
+ s = document.location.search;
+ var parts = s.substr(s.indexOf('?') + 1).split('&');
+ var result = {};
+ for (var i = 0; i < parts.length; i++) {
+ var tmp = parts[i].split('=', 2);
+ var key = jQuery.urldecode(tmp[0]);
+ var value = jQuery.urldecode(tmp[1]);
+ if (key in result)
+ result[key].push(value);
+ else
+ result[key] = [value];
+ }
+ return result;
+};
+
+/**
+ * highlight a given string on a jquery object by wrapping it in
+ * span elements with the given class name.
+ */
+jQuery.fn.highlightText = function(text, className) {
+ function highlight(node) {
+ if (node.nodeType == 3) {
+ var val = node.nodeValue;
+ var pos = val.toLowerCase().indexOf(text);
+ if (pos >= 0 && !jQuery(node.parentNode).hasClass(className)) {
+ var span = document.createElement("span");
+ span.className = className;
+ span.appendChild(document.createTextNode(val.substr(pos, text.length)));
+ node.parentNode.insertBefore(span, node.parentNode.insertBefore(
+ document.createTextNode(val.substr(pos + text.length)),
+ node.nextSibling));
+ node.nodeValue = val.substr(0, pos);
+ }
+ }
+ else if (!jQuery(node).is("button, select, textarea")) {
+ jQuery.each(node.childNodes, function() {
+ highlight(this);
+ });
+ }
+ }
+ return this.each(function() {
+ highlight(this);
+ });
+};
+
+/**
+ * Small JavaScript module for the documentation.
+ */
+var Documentation = {
+
+ init : function() {
+ this.fixFirefoxAnchorBug();
+ this.highlightSearchWords();
+ this.initIndexTable();
+ },
+
+ /**
+ * i18n support
+ */
+ TRANSLATIONS : {},
+ PLURAL_EXPR : function(n) { return n == 1 ? 0 : 1; },
+ LOCALE : 'unknown',
+
+ // gettext and ngettext don't access this so that the functions
+ // can safely bound to a different name (_ = Documentation.gettext)
+ gettext : function(string) {
+ var translated = Documentation.TRANSLATIONS[string];
+ if (typeof translated == 'undefined')
+ return string;
+ return (typeof translated == 'string') ? translated : translated[0];
+ },
+
+ ngettext : function(singular, plural, n) {
+ var translated = Documentation.TRANSLATIONS[singular];
+ if (typeof translated == 'undefined')
+ return (n == 1) ? singular : plural;
+ return translated[Documentation.PLURALEXPR(n)];
+ },
+
+ addTranslations : function(catalog) {
+ for (var key in catalog.messages)
+ this.TRANSLATIONS[key] = catalog.messages[key];
+ this.PLURAL_EXPR = new Function('n', 'return +(' + catalog.plural_expr + ')');
+ this.LOCALE = catalog.locale;
+ },
+
+ /**
+ * add context elements like header anchor links
+ */
+ addContextElements : function() {
+ $('div[id] > :header:first').each(function() {
+ $('<a class="headerlink">\u00B6</a>').
+ attr('href', '#' + this.id).
+ attr('title', _('Permalink to this headline')).
+ appendTo(this);
+ });
+ $('dt[id]').each(function() {
+ $('<a class="headerlink">\u00B6</a>').
+ attr('href', '#' + this.id).
+ attr('title', _('Permalink to this definition')).
+ appendTo(this);
+ });
+ },
+
+ /**
+ * workaround a firefox stupidity
+ */
+ fixFirefoxAnchorBug : function() {
+ if (document.location.hash && $.browser.mozilla)
+ window.setTimeout(function() {
+ document.location.href += '';
+ }, 10);
+ },
+
+ /**
+ * highlight the search words provided in the url in the text
+ */
+ highlightSearchWords : function() {
+ var params = $.getQueryParameters();
+ var terms = (params.highlight) ? params.highlight[0].split(/\s+/) : [];
+ if (terms.length) {
+ var body = $('div.body');
+ if (!body.length) {
+ body = $('body');
+ }
+ window.setTimeout(function() {
+ $.each(terms, function() {
+ body.highlightText(this.toLowerCase(), 'highlighted');
+ });
+ }, 10);
+ $('<p class="highlight-link"><a href="javascript:Documentation.' +
+ 'hideSearchWords()">' + _('Hide Search Matches') + '</a></p>')
+ .appendTo($('#searchbox'));
+ }
+ },
+
+ /**
+ * init the domain index toggle buttons
+ */
+ initIndexTable : function() {
+ var togglers = $('img.toggler').click(function() {
+ var src = $(this).attr('src');
+ var idnum = $(this).attr('id').substr(7);
+ $('tr.cg-' + idnum).toggle();
+ if (src.substr(-9) == 'minus.png')
+ $(this).attr('src', src.substr(0, src.length-9) + 'plus.png');
+ else
+ $(this).attr('src', src.substr(0, src.length-8) + 'minus.png');
+ }).css('display', '');
+ if (DOCUMENTATION_OPTIONS.COLLAPSE_INDEX) {
+ togglers.click();
+ }
+ },
+
+ /**
+ * helper function to hide the search marks again
+ */
+ hideSearchWords : function() {
+ $('#searchbox .highlight-link').fadeOut(300);
+ $('span.highlighted').removeClass('highlighted');
+ },
+
+ /**
+ * make the url absolute
+ */
+ makeURL : function(relativeURL) {
+ return DOCUMENTATION_OPTIONS.URL_ROOT + '/' + relativeURL;
+ },
+
+ /**
+ * get the current relative url
+ */
+ getCurrentURL : function() {
+ var path = document.location.pathname;
+ var parts = path.split(/\//);
+ $.each(DOCUMENTATION_OPTIONS.URL_ROOT.split(/\//), function() {
+ if (this == '..')
+ parts.pop();
+ });
+ var url = parts.join('/');
+ return path.substring(url.lastIndexOf('/') + 1, path.length - 1);
+ }
+};
+
+// quick alias for translations
+_ = Documentation.gettext;
+
+$(document).ready(function() {
+ Documentation.init();
+});
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diff --git a/python/altgraph/doc/_build/html/_static/jquery.js b/python/altgraph/doc/_build/html/_static/jquery.js
new file mode 100644
index 000000000..83589daa7
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diff --git a/python/altgraph/doc/_build/html/_static/minus.png b/python/altgraph/doc/_build/html/_static/minus.png
new file mode 100644
index 000000000..da1c5620d
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_static/minus.png
Binary files differ
diff --git a/python/altgraph/doc/_build/html/_static/nature.css b/python/altgraph/doc/_build/html/_static/nature.css
new file mode 100644
index 000000000..f46081870
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_static/nature.css
@@ -0,0 +1,245 @@
+/*
+ * nature.css_t
+ * ~~~~~~~~~~~~
+ *
+ * Sphinx stylesheet -- nature theme.
+ *
+ * :copyright: Copyright 2007-2013 by the Sphinx team, see AUTHORS.
+ * :license: BSD, see LICENSE for details.
+ *
+ */
+
+@import url("basic.css");
+
+/* -- page layout ----------------------------------------------------------- */
+
+body {
+ font-family: Arial, sans-serif;
+ font-size: 100%;
+ background-color: #111;
+ color: #555;
+ margin: 0;
+ padding: 0;
+}
+
+div.documentwrapper {
+ float: left;
+ width: 100%;
+}
+
+div.bodywrapper {
+ margin: 0 0 0 230px;
+}
+
+hr {
+ border: 1px solid #B1B4B6;
+}
+
+div.document {
+ background-color: #eee;
+}
+
+div.body {
+ background-color: #ffffff;
+ color: #3E4349;
+ padding: 0 30px 30px 30px;
+ font-size: 0.9em;
+}
+
+div.footer {
+ color: #555;
+ width: 100%;
+ padding: 13px 0;
+ text-align: center;
+ font-size: 75%;
+}
+
+div.footer a {
+ color: #444;
+ text-decoration: underline;
+}
+
+div.related {
+ background-color: #6BA81E;
+ line-height: 32px;
+ color: #fff;
+ text-shadow: 0px 1px 0 #444;
+ font-size: 0.9em;
+}
+
+div.related a {
+ color: #E2F3CC;
+}
+
+div.sphinxsidebar {
+ font-size: 0.75em;
+ line-height: 1.5em;
+}
+
+div.sphinxsidebarwrapper{
+ padding: 20px 0;
+}
+
+div.sphinxsidebar h3,
+div.sphinxsidebar h4 {
+ font-family: Arial, sans-serif;
+ color: #222;
+ font-size: 1.2em;
+ font-weight: normal;
+ margin: 0;
+ padding: 5px 10px;
+ background-color: #ddd;
+ text-shadow: 1px 1px 0 white
+}
+
+div.sphinxsidebar h4{
+ font-size: 1.1em;
+}
+
+div.sphinxsidebar h3 a {
+ color: #444;
+}
+
+
+div.sphinxsidebar p {
+ color: #888;
+ padding: 5px 20px;
+}
+
+div.sphinxsidebar p.topless {
+}
+
+div.sphinxsidebar ul {
+ margin: 10px 20px;
+ padding: 0;
+ color: #000;
+}
+
+div.sphinxsidebar a {
+ color: #444;
+}
+
+div.sphinxsidebar input {
+ border: 1px solid #ccc;
+ font-family: sans-serif;
+ font-size: 1em;
+}
+
+div.sphinxsidebar input[type=text]{
+ margin-left: 20px;
+}
+
+/* -- body styles ----------------------------------------------------------- */
+
+a {
+ color: #005B81;
+ text-decoration: none;
+}
+
+a:hover {
+ color: #E32E00;
+ text-decoration: underline;
+}
+
+div.body h1,
+div.body h2,
+div.body h3,
+div.body h4,
+div.body h5,
+div.body h6 {
+ font-family: Arial, sans-serif;
+ background-color: #BED4EB;
+ font-weight: normal;
+ color: #212224;
+ margin: 30px 0px 10px 0px;
+ padding: 5px 0 5px 10px;
+ text-shadow: 0px 1px 0 white
+}
+
+div.body h1 { border-top: 20px solid white; margin-top: 0; font-size: 200%; }
+div.body h2 { font-size: 150%; background-color: #C8D5E3; }
+div.body h3 { font-size: 120%; background-color: #D8DEE3; }
+div.body h4 { font-size: 110%; background-color: #D8DEE3; }
+div.body h5 { font-size: 100%; background-color: #D8DEE3; }
+div.body h6 { font-size: 100%; background-color: #D8DEE3; }
+
+a.headerlink {
+ color: #c60f0f;
+ font-size: 0.8em;
+ padding: 0 4px 0 4px;
+ text-decoration: none;
+}
+
+a.headerlink:hover {
+ background-color: #c60f0f;
+ color: white;
+}
+
+div.body p, div.body dd, div.body li {
+ line-height: 1.5em;
+}
+
+div.admonition p.admonition-title + p {
+ display: inline;
+}
+
+div.highlight{
+ background-color: white;
+}
+
+div.note {
+ background-color: #eee;
+ border: 1px solid #ccc;
+}
+
+div.seealso {
+ background-color: #ffc;
+ border: 1px solid #ff6;
+}
+
+div.topic {
+ background-color: #eee;
+}
+
+div.warning {
+ background-color: #ffe4e4;
+ border: 1px solid #f66;
+}
+
+p.admonition-title {
+ display: inline;
+}
+
+p.admonition-title:after {
+ content: ":";
+}
+
+pre {
+ padding: 10px;
+ background-color: White;
+ color: #222;
+ line-height: 1.2em;
+ border: 1px solid #C6C9CB;
+ font-size: 1.1em;
+ margin: 1.5em 0 1.5em 0;
+ -webkit-box-shadow: 1px 1px 1px #d8d8d8;
+ -moz-box-shadow: 1px 1px 1px #d8d8d8;
+}
+
+tt {
+ background-color: #ecf0f3;
+ color: #222;
+ /* padding: 1px 2px; */
+ font-size: 1.1em;
+ font-family: monospace;
+}
+
+.viewcode-back {
+ font-family: Arial, sans-serif;
+}
+
+div.viewcode-block:target {
+ background-color: #f4debf;
+ border-top: 1px solid #ac9;
+ border-bottom: 1px solid #ac9;
+} \ No newline at end of file
diff --git a/python/altgraph/doc/_build/html/_static/plus.png b/python/altgraph/doc/_build/html/_static/plus.png
new file mode 100644
index 000000000..b3cb37425
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_static/plus.png
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diff --git a/python/altgraph/doc/_build/html/_static/pygments.css b/python/altgraph/doc/_build/html/_static/pygments.css
new file mode 100644
index 000000000..d79caa151
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_static/pygments.css
@@ -0,0 +1,62 @@
+.highlight .hll { background-color: #ffffcc }
+.highlight { background: #eeffcc; }
+.highlight .c { color: #408090; font-style: italic } /* Comment */
+.highlight .err { border: 1px solid #FF0000 } /* Error */
+.highlight .k { color: #007020; font-weight: bold } /* Keyword */
+.highlight .o { color: #666666 } /* Operator */
+.highlight .cm { color: #408090; font-style: italic } /* Comment.Multiline */
+.highlight .cp { color: #007020 } /* Comment.Preproc */
+.highlight .c1 { color: #408090; font-style: italic } /* Comment.Single */
+.highlight .cs { color: #408090; background-color: #fff0f0 } /* Comment.Special */
+.highlight .gd { color: #A00000 } /* Generic.Deleted */
+.highlight .ge { font-style: italic } /* Generic.Emph */
+.highlight .gr { color: #FF0000 } /* Generic.Error */
+.highlight .gh { color: #000080; font-weight: bold } /* Generic.Heading */
+.highlight .gi { color: #00A000 } /* Generic.Inserted */
+.highlight .go { color: #333333 } /* Generic.Output */
+.highlight .gp { color: #c65d09; font-weight: bold } /* Generic.Prompt */
+.highlight .gs { font-weight: bold } /* Generic.Strong */
+.highlight .gu { color: #800080; font-weight: bold } /* Generic.Subheading */
+.highlight .gt { color: #0044DD } /* Generic.Traceback */
+.highlight .kc { color: #007020; font-weight: bold } /* Keyword.Constant */
+.highlight .kd { color: #007020; font-weight: bold } /* Keyword.Declaration */
+.highlight .kn { color: #007020; font-weight: bold } /* Keyword.Namespace */
+.highlight .kp { color: #007020 } /* Keyword.Pseudo */
+.highlight .kr { color: #007020; font-weight: bold } /* Keyword.Reserved */
+.highlight .kt { color: #902000 } /* Keyword.Type */
+.highlight .m { color: #208050 } /* Literal.Number */
+.highlight .s { color: #4070a0 } /* Literal.String */
+.highlight .na { color: #4070a0 } /* Name.Attribute */
+.highlight .nb { color: #007020 } /* Name.Builtin */
+.highlight .nc { color: #0e84b5; font-weight: bold } /* Name.Class */
+.highlight .no { color: #60add5 } /* Name.Constant */
+.highlight .nd { color: #555555; font-weight: bold } /* Name.Decorator */
+.highlight .ni { color: #d55537; font-weight: bold } /* Name.Entity */
+.highlight .ne { color: #007020 } /* Name.Exception */
+.highlight .nf { color: #06287e } /* Name.Function */
+.highlight .nl { color: #002070; font-weight: bold } /* Name.Label */
+.highlight .nn { color: #0e84b5; font-weight: bold } /* Name.Namespace */
+.highlight .nt { color: #062873; font-weight: bold } /* Name.Tag */
+.highlight .nv { color: #bb60d5 } /* Name.Variable */
+.highlight .ow { color: #007020; font-weight: bold } /* Operator.Word */
+.highlight .w { color: #bbbbbb } /* Text.Whitespace */
+.highlight .mf { color: #208050 } /* Literal.Number.Float */
+.highlight .mh { color: #208050 } /* Literal.Number.Hex */
+.highlight .mi { color: #208050 } /* Literal.Number.Integer */
+.highlight .mo { color: #208050 } /* Literal.Number.Oct */
+.highlight .sb { color: #4070a0 } /* Literal.String.Backtick */
+.highlight .sc { color: #4070a0 } /* Literal.String.Char */
+.highlight .sd { color: #4070a0; font-style: italic } /* Literal.String.Doc */
+.highlight .s2 { color: #4070a0 } /* Literal.String.Double */
+.highlight .se { color: #4070a0; font-weight: bold } /* Literal.String.Escape */
+.highlight .sh { color: #4070a0 } /* Literal.String.Heredoc */
+.highlight .si { color: #70a0d0; font-style: italic } /* Literal.String.Interpol */
+.highlight .sx { color: #c65d09 } /* Literal.String.Other */
+.highlight .sr { color: #235388 } /* Literal.String.Regex */
+.highlight .s1 { color: #4070a0 } /* Literal.String.Single */
+.highlight .ss { color: #517918 } /* Literal.String.Symbol */
+.highlight .bp { color: #007020 } /* Name.Builtin.Pseudo */
+.highlight .vc { color: #bb60d5 } /* Name.Variable.Class */
+.highlight .vg { color: #bb60d5 } /* Name.Variable.Global */
+.highlight .vi { color: #bb60d5 } /* Name.Variable.Instance */
+.highlight .il { color: #208050 } /* Literal.Number.Integer.Long */ \ No newline at end of file
diff --git a/python/altgraph/doc/_build/html/_static/searchtools.js b/python/altgraph/doc/_build/html/_static/searchtools.js
new file mode 100644
index 000000000..f5c7e5fee
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_static/searchtools.js
@@ -0,0 +1,622 @@
+/*
+ * searchtools.js_t
+ * ~~~~~~~~~~~~~~~~
+ *
+ * Sphinx JavaScript utilties for the full-text search.
+ *
+ * :copyright: Copyright 2007-2013 by the Sphinx team, see AUTHORS.
+ * :license: BSD, see LICENSE for details.
+ *
+ */
+
+
+/**
+ * Porter Stemmer
+ */
+var Stemmer = function() {
+
+ var step2list = {
+ ational: 'ate',
+ tional: 'tion',
+ enci: 'ence',
+ anci: 'ance',
+ izer: 'ize',
+ bli: 'ble',
+ alli: 'al',
+ entli: 'ent',
+ eli: 'e',
+ ousli: 'ous',
+ ization: 'ize',
+ ation: 'ate',
+ ator: 'ate',
+ alism: 'al',
+ iveness: 'ive',
+ fulness: 'ful',
+ ousness: 'ous',
+ aliti: 'al',
+ iviti: 'ive',
+ biliti: 'ble',
+ logi: 'log'
+ };
+
+ var step3list = {
+ icate: 'ic',
+ ative: '',
+ alize: 'al',
+ iciti: 'ic',
+ ical: 'ic',
+ ful: '',
+ ness: ''
+ };
+
+ var c = "[^aeiou]"; // consonant
+ var v = "[aeiouy]"; // vowel
+ var C = c + "[^aeiouy]*"; // consonant sequence
+ var V = v + "[aeiou]*"; // vowel sequence
+
+ var mgr0 = "^(" + C + ")?" + V + C; // [C]VC... is m>0
+ var meq1 = "^(" + C + ")?" + V + C + "(" + V + ")?$"; // [C]VC[V] is m=1
+ var mgr1 = "^(" + C + ")?" + V + C + V + C; // [C]VCVC... is m>1
+ var s_v = "^(" + C + ")?" + v; // vowel in stem
+
+ this.stemWord = function (w) {
+ var stem;
+ var suffix;
+ var firstch;
+ var origword = w;
+
+ if (w.length < 3)
+ return w;
+
+ var re;
+ var re2;
+ var re3;
+ var re4;
+
+ firstch = w.substr(0,1);
+ if (firstch == "y")
+ w = firstch.toUpperCase() + w.substr(1);
+
+ // Step 1a
+ re = /^(.+?)(ss|i)es$/;
+ re2 = /^(.+?)([^s])s$/;
+
+ if (re.test(w))
+ w = w.replace(re,"$1$2");
+ else if (re2.test(w))
+ w = w.replace(re2,"$1$2");
+
+ // Step 1b
+ re = /^(.+?)eed$/;
+ re2 = /^(.+?)(ed|ing)$/;
+ if (re.test(w)) {
+ var fp = re.exec(w);
+ re = new RegExp(mgr0);
+ if (re.test(fp[1])) {
+ re = /.$/;
+ w = w.replace(re,"");
+ }
+ }
+ else if (re2.test(w)) {
+ var fp = re2.exec(w);
+ stem = fp[1];
+ re2 = new RegExp(s_v);
+ if (re2.test(stem)) {
+ w = stem;
+ re2 = /(at|bl|iz)$/;
+ re3 = new RegExp("([^aeiouylsz])\\1$");
+ re4 = new RegExp("^" + C + v + "[^aeiouwxy]$");
+ if (re2.test(w))
+ w = w + "e";
+ else if (re3.test(w)) {
+ re = /.$/;
+ w = w.replace(re,"");
+ }
+ else if (re4.test(w))
+ w = w + "e";
+ }
+ }
+
+ // Step 1c
+ re = /^(.+?)y$/;
+ if (re.test(w)) {
+ var fp = re.exec(w);
+ stem = fp[1];
+ re = new RegExp(s_v);
+ if (re.test(stem))
+ w = stem + "i";
+ }
+
+ // Step 2
+ re = /^(.+?)(ational|tional|enci|anci|izer|bli|alli|entli|eli|ousli|ization|ation|ator|alism|iveness|fulness|ousness|aliti|iviti|biliti|logi)$/;
+ if (re.test(w)) {
+ var fp = re.exec(w);
+ stem = fp[1];
+ suffix = fp[2];
+ re = new RegExp(mgr0);
+ if (re.test(stem))
+ w = stem + step2list[suffix];
+ }
+
+ // Step 3
+ re = /^(.+?)(icate|ative|alize|iciti|ical|ful|ness)$/;
+ if (re.test(w)) {
+ var fp = re.exec(w);
+ stem = fp[1];
+ suffix = fp[2];
+ re = new RegExp(mgr0);
+ if (re.test(stem))
+ w = stem + step3list[suffix];
+ }
+
+ // Step 4
+ re = /^(.+?)(al|ance|ence|er|ic|able|ible|ant|ement|ment|ent|ou|ism|ate|iti|ous|ive|ize)$/;
+ re2 = /^(.+?)(s|t)(ion)$/;
+ if (re.test(w)) {
+ var fp = re.exec(w);
+ stem = fp[1];
+ re = new RegExp(mgr1);
+ if (re.test(stem))
+ w = stem;
+ }
+ else if (re2.test(w)) {
+ var fp = re2.exec(w);
+ stem = fp[1] + fp[2];
+ re2 = new RegExp(mgr1);
+ if (re2.test(stem))
+ w = stem;
+ }
+
+ // Step 5
+ re = /^(.+?)e$/;
+ if (re.test(w)) {
+ var fp = re.exec(w);
+ stem = fp[1];
+ re = new RegExp(mgr1);
+ re2 = new RegExp(meq1);
+ re3 = new RegExp("^" + C + v + "[^aeiouwxy]$");
+ if (re.test(stem) || (re2.test(stem) && !(re3.test(stem))))
+ w = stem;
+ }
+ re = /ll$/;
+ re2 = new RegExp(mgr1);
+ if (re.test(w) && re2.test(w)) {
+ re = /.$/;
+ w = w.replace(re,"");
+ }
+
+ // and turn initial Y back to y
+ if (firstch == "y")
+ w = firstch.toLowerCase() + w.substr(1);
+ return w;
+ }
+}
+
+
+
+/**
+ * Simple result scoring code.
+ */
+var Scorer = {
+ // Implement the following function to further tweak the score for each result
+ // The function takes a result array [filename, title, anchor, descr, score]
+ // and returns the new score.
+ /*
+ score: function(result) {
+ return result[4];
+ },
+ */
+
+ // query matches the full name of an object
+ objNameMatch: 11,
+ // or matches in the last dotted part of the object name
+ objPartialMatch: 6,
+ // Additive scores depending on the priority of the object
+ objPrio: {0: 15, // used to be importantResults
+ 1: 5, // used to be objectResults
+ 2: -5}, // used to be unimportantResults
+ // Used when the priority is not in the mapping.
+ objPrioDefault: 0,
+
+ // query found in title
+ title: 15,
+ // query found in terms
+ term: 5
+};
+
+
+/**
+ * Search Module
+ */
+var Search = {
+
+ _index : null,
+ _queued_query : null,
+ _pulse_status : -1,
+
+ init : function() {
+ var params = $.getQueryParameters();
+ if (params.q) {
+ var query = params.q[0];
+ $('input[name="q"]')[0].value = query;
+ this.performSearch(query);
+ }
+ },
+
+ loadIndex : function(url) {
+ $.ajax({type: "GET", url: url, data: null,
+ dataType: "script", cache: true,
+ complete: function(jqxhr, textstatus) {
+ if (textstatus != "success") {
+ document.getElementById("searchindexloader").src = url;
+ }
+ }});
+ },
+
+ setIndex : function(index) {
+ var q;
+ this._index = index;
+ if ((q = this._queued_query) !== null) {
+ this._queued_query = null;
+ Search.query(q);
+ }
+ },
+
+ hasIndex : function() {
+ return this._index !== null;
+ },
+
+ deferQuery : function(query) {
+ this._queued_query = query;
+ },
+
+ stopPulse : function() {
+ this._pulse_status = 0;
+ },
+
+ startPulse : function() {
+ if (this._pulse_status >= 0)
+ return;
+ function pulse() {
+ var i;
+ Search._pulse_status = (Search._pulse_status + 1) % 4;
+ var dotString = '';
+ for (i = 0; i < Search._pulse_status; i++)
+ dotString += '.';
+ Search.dots.text(dotString);
+ if (Search._pulse_status > -1)
+ window.setTimeout(pulse, 500);
+ }
+ pulse();
+ },
+
+ /**
+ * perform a search for something (or wait until index is loaded)
+ */
+ performSearch : function(query) {
+ // create the required interface elements
+ this.out = $('#search-results');
+ this.title = $('<h2>' + _('Searching') + '</h2>').appendTo(this.out);
+ this.dots = $('<span></span>').appendTo(this.title);
+ this.status = $('<p style="display: none"></p>').appendTo(this.out);
+ this.output = $('<ul class="search"/>').appendTo(this.out);
+
+ $('#search-progress').text(_('Preparing search...'));
+ this.startPulse();
+
+ // index already loaded, the browser was quick!
+ if (this.hasIndex())
+ this.query(query);
+ else
+ this.deferQuery(query);
+ },
+
+ /**
+ * execute search (requires search index to be loaded)
+ */
+ query : function(query) {
+ var i;
+ var stopwords = ["a","and","are","as","at","be","but","by","for","if","in","into","is","it","near","no","not","of","on","or","such","that","the","their","then","there","these","they","this","to","was","will","with"];
+
+ // stem the searchterms and add them to the correct list
+ var stemmer = new Stemmer();
+ var searchterms = [];
+ var excluded = [];
+ var hlterms = [];
+ var tmp = query.split(/\s+/);
+ var objectterms = [];
+ for (i = 0; i < tmp.length; i++) {
+ if (tmp[i] !== "") {
+ objectterms.push(tmp[i].toLowerCase());
+ }
+
+ if ($u.indexOf(stopwords, tmp[i].toLowerCase()) != -1 || tmp[i].match(/^\d+$/) ||
+ tmp[i] === "") {
+ // skip this "word"
+ continue;
+ }
+ // stem the word
+ var word = stemmer.stemWord(tmp[i].toLowerCase());
+ var toAppend;
+ // select the correct list
+ if (word[0] == '-') {
+ toAppend = excluded;
+ word = word.substr(1);
+ }
+ else {
+ toAppend = searchterms;
+ hlterms.push(tmp[i].toLowerCase());
+ }
+ // only add if not already in the list
+ if (!$u.contains(toAppend, word))
+ toAppend.push(word);
+ }
+ var highlightstring = '?highlight=' + $.urlencode(hlterms.join(" "));
+
+ // console.debug('SEARCH: searching for:');
+ // console.info('required: ', searchterms);
+ // console.info('excluded: ', excluded);
+
+ // prepare search
+ var terms = this._index.terms;
+ var titleterms = this._index.titleterms;
+
+ // array of [filename, title, anchor, descr, score]
+ var results = [];
+ $('#search-progress').empty();
+
+ // lookup as object
+ for (i = 0; i < objectterms.length; i++) {
+ var others = [].concat(objectterms.slice(0, i),
+ objectterms.slice(i+1, objectterms.length));
+ results = results.concat(this.performObjectSearch(objectterms[i], others));
+ }
+
+ // lookup as search terms in fulltext
+ results = results.concat(this.performTermsSearch(searchterms, excluded, terms, Scorer.term))
+ .concat(this.performTermsSearch(searchterms, excluded, titleterms, Scorer.title));
+
+ // let the scorer override scores with a custom scoring function
+ if (Scorer.score) {
+ for (i = 0; i < results.length; i++)
+ results[i][4] = Scorer.score(results[i]);
+ }
+
+ // now sort the results by score (in opposite order of appearance, since the
+ // display function below uses pop() to retrieve items) and then
+ // alphabetically
+ results.sort(function(a, b) {
+ var left = a[4];
+ var right = b[4];
+ if (left > right) {
+ return 1;
+ } else if (left < right) {
+ return -1;
+ } else {
+ // same score: sort alphabetically
+ left = a[1].toLowerCase();
+ right = b[1].toLowerCase();
+ return (left > right) ? -1 : ((left < right) ? 1 : 0);
+ }
+ });
+
+ // for debugging
+ //Search.lastresults = results.slice(); // a copy
+ //console.info('search results:', Search.lastresults);
+
+ // print the results
+ var resultCount = results.length;
+ function displayNextItem() {
+ // results left, load the summary and display it
+ if (results.length) {
+ var item = results.pop();
+ var listItem = $('<li style="display:none"></li>');
+ if (DOCUMENTATION_OPTIONS.FILE_SUFFIX === '') {
+ // dirhtml builder
+ var dirname = item[0] + '/';
+ if (dirname.match(/\/index\/$/)) {
+ dirname = dirname.substring(0, dirname.length-6);
+ } else if (dirname == 'index/') {
+ dirname = '';
+ }
+ listItem.append($('<a/>').attr('href',
+ DOCUMENTATION_OPTIONS.URL_ROOT + dirname +
+ highlightstring + item[2]).html(item[1]));
+ } else {
+ // normal html builders
+ listItem.append($('<a/>').attr('href',
+ item[0] + DOCUMENTATION_OPTIONS.FILE_SUFFIX +
+ highlightstring + item[2]).html(item[1]));
+ }
+ if (item[3]) {
+ listItem.append($('<span> (' + item[3] + ')</span>'));
+ Search.output.append(listItem);
+ listItem.slideDown(5, function() {
+ displayNextItem();
+ });
+ } else if (DOCUMENTATION_OPTIONS.HAS_SOURCE) {
+ $.ajax({url: DOCUMENTATION_OPTIONS.URL_ROOT + '_sources/' + item[0] + '.txt',
+ dataType: "text",
+ complete: function(jqxhr, textstatus) {
+ var data = jqxhr.responseText;
+ if (data !== '') {
+ listItem.append(Search.makeSearchSummary(data, searchterms, hlterms));
+ }
+ Search.output.append(listItem);
+ listItem.slideDown(5, function() {
+ displayNextItem();
+ });
+ }});
+ } else {
+ // no source available, just display title
+ Search.output.append(listItem);
+ listItem.slideDown(5, function() {
+ displayNextItem();
+ });
+ }
+ }
+ // search finished, update title and status message
+ else {
+ Search.stopPulse();
+ Search.title.text(_('Search Results'));
+ if (!resultCount)
+ Search.status.text(_('Your search did not match any documents. Please make sure that all words are spelled correctly and that you\'ve selected enough categories.'));
+ else
+ Search.status.text(_('Search finished, found %s page(s) matching the search query.').replace('%s', resultCount));
+ Search.status.fadeIn(500);
+ }
+ }
+ displayNextItem();
+ },
+
+ /**
+ * search for object names
+ */
+ performObjectSearch : function(object, otherterms) {
+ var filenames = this._index.filenames;
+ var objects = this._index.objects;
+ var objnames = this._index.objnames;
+ var titles = this._index.titles;
+
+ var i;
+ var results = [];
+
+ for (var prefix in objects) {
+ for (var name in objects[prefix]) {
+ var fullname = (prefix ? prefix + '.' : '') + name;
+ if (fullname.toLowerCase().indexOf(object) > -1) {
+ var score = 0;
+ var parts = fullname.split('.');
+ // check for different match types: exact matches of full name or
+ // "last name" (i.e. last dotted part)
+ if (fullname == object || parts[parts.length - 1] == object) {
+ score += Scorer.objNameMatch;
+ // matches in last name
+ } else if (parts[parts.length - 1].indexOf(object) > -1) {
+ score += Scorer.objPartialMatch;
+ }
+ var match = objects[prefix][name];
+ var objname = objnames[match[1]][2];
+ var title = titles[match[0]];
+ // If more than one term searched for, we require other words to be
+ // found in the name/title/description
+ if (otherterms.length > 0) {
+ var haystack = (prefix + ' ' + name + ' ' +
+ objname + ' ' + title).toLowerCase();
+ var allfound = true;
+ for (i = 0; i < otherterms.length; i++) {
+ if (haystack.indexOf(otherterms[i]) == -1) {
+ allfound = false;
+ break;
+ }
+ }
+ if (!allfound) {
+ continue;
+ }
+ }
+ var descr = objname + _(', in ') + title;
+
+ var anchor = match[3];
+ if (anchor === '')
+ anchor = fullname;
+ else if (anchor == '-')
+ anchor = objnames[match[1]][1] + '-' + fullname;
+ // add custom score for some objects according to scorer
+ if (Scorer.objPrio.hasOwnProperty(match[2])) {
+ score += Scorer.objPrio[match[2]];
+ } else {
+ score += Scorer.objPrioDefault;
+ }
+ results.push([filenames[match[0]], fullname, '#'+anchor, descr, score]);
+ }
+ }
+ }
+
+ return results;
+ },
+
+ /**
+ * search for full-text terms in the index
+ */
+ performTermsSearch : function(searchterms, excluded, terms, score) {
+ var filenames = this._index.filenames;
+ var titles = this._index.titles;
+
+ var i, j, file, files;
+ var fileMap = {};
+ var results = [];
+
+ // perform the search on the required terms
+ for (i = 0; i < searchterms.length; i++) {
+ var word = searchterms[i];
+ // no match but word was a required one
+ if ((files = terms[word]) === undefined)
+ break;
+ if (files.length === undefined) {
+ files = [files];
+ }
+ // create the mapping
+ for (j = 0; j < files.length; j++) {
+ file = files[j];
+ if (file in fileMap)
+ fileMap[file].push(word);
+ else
+ fileMap[file] = [word];
+ }
+ }
+
+ // now check if the files don't contain excluded terms
+ for (file in fileMap) {
+ var valid = true;
+
+ // check if all requirements are matched
+ if (fileMap[file].length != searchterms.length)
+ continue;
+
+ // ensure that none of the excluded terms is in the search result
+ for (i = 0; i < excluded.length; i++) {
+ if (terms[excluded[i]] == file ||
+ $u.contains(terms[excluded[i]] || [], file)) {
+ valid = false;
+ break;
+ }
+ }
+
+ // if we have still a valid result we can add it to the result list
+ if (valid) {
+ results.push([filenames[file], titles[file], '', null, score]);
+ }
+ }
+ return results;
+ },
+
+ /**
+ * helper function to return a node containing the
+ * search summary for a given text. keywords is a list
+ * of stemmed words, hlwords is the list of normal, unstemmed
+ * words. the first one is used to find the occurance, the
+ * latter for highlighting it.
+ */
+ makeSearchSummary : function(text, keywords, hlwords) {
+ var textLower = text.toLowerCase();
+ var start = 0;
+ $.each(keywords, function() {
+ var i = textLower.indexOf(this.toLowerCase());
+ if (i > -1)
+ start = i;
+ });
+ start = Math.max(start - 120, 0);
+ var excerpt = ((start > 0) ? '...' : '') +
+ $.trim(text.substr(start, 240)) +
+ ((start + 240 - text.length) ? '...' : '');
+ var rv = $('<div class="context"></div>').text(excerpt);
+ $.each(hlwords, function() {
+ rv = rv.highlightText(this, 'highlighted');
+ });
+ return rv;
+ }
+};
+
+$(document).ready(function() {
+ Search.init();
+}); \ No newline at end of file
diff --git a/python/altgraph/doc/_build/html/_static/underscore.js b/python/altgraph/doc/_build/html/_static/underscore.js
new file mode 100644
index 000000000..5b55f32be
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_static/underscore.js
@@ -0,0 +1,31 @@
+// Underscore.js 1.3.1
+// (c) 2009-2012 Jeremy Ashkenas, DocumentCloud Inc.
+// Underscore is freely distributable under the MIT license.
+// Portions of Underscore are inspired or borrowed from Prototype,
+// Oliver Steele's Functional, and John Resig's Micro-Templating.
+// For all details and documentation:
+// http://documentcloud.github.com/underscore
+(function(){function q(a,c,d){if(a===c)return a!==0||1/a==1/c;if(a==null||c==null)return a===c;if(a._chain)a=a._wrapped;if(c._chain)c=c._wrapped;if(a.isEqual&&b.isFunction(a.isEqual))return a.isEqual(c);if(c.isEqual&&b.isFunction(c.isEqual))return c.isEqual(a);var e=l.call(a);if(e!=l.call(c))return false;switch(e){case "[object String]":return a==String(c);case "[object Number]":return a!=+a?c!=+c:a==0?1/a==1/c:a==+c;case "[object Date]":case "[object Boolean]":return+a==+c;case "[object RegExp]":return a.source==
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diff --git a/python/altgraph/doc/_build/html/_static/up-pressed.png b/python/altgraph/doc/_build/html/_static/up-pressed.png
new file mode 100644
index 000000000..8bd587afe
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_static/up-pressed.png
Binary files differ
diff --git a/python/altgraph/doc/_build/html/_static/up.png b/python/altgraph/doc/_build/html/_static/up.png
new file mode 100644
index 000000000..b94625680
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_static/up.png
Binary files differ
diff --git a/python/altgraph/doc/_build/html/_static/websupport.js b/python/altgraph/doc/_build/html/_static/websupport.js
new file mode 100644
index 000000000..19fcda564
--- /dev/null
+++ b/python/altgraph/doc/_build/html/_static/websupport.js
@@ -0,0 +1,808 @@
+/*
+ * websupport.js
+ * ~~~~~~~~~~~~~
+ *
+ * sphinx.websupport utilties for all documentation.
+ *
+ * :copyright: Copyright 2007-2013 by the Sphinx team, see AUTHORS.
+ * :license: BSD, see LICENSE for details.
+ *
+ */
+
+(function($) {
+ $.fn.autogrow = function() {
+ return this.each(function() {
+ var textarea = this;
+
+ $.fn.autogrow.resize(textarea);
+
+ $(textarea)
+ .focus(function() {
+ textarea.interval = setInterval(function() {
+ $.fn.autogrow.resize(textarea);
+ }, 500);
+ })
+ .blur(function() {
+ clearInterval(textarea.interval);
+ });
+ });
+ };
+
+ $.fn.autogrow.resize = function(textarea) {
+ var lineHeight = parseInt($(textarea).css('line-height'), 10);
+ var lines = textarea.value.split('\n');
+ var columns = textarea.cols;
+ var lineCount = 0;
+ $.each(lines, function() {
+ lineCount += Math.ceil(this.length / columns) || 1;
+ });
+ var height = lineHeight * (lineCount + 1);
+ $(textarea).css('height', height);
+ };
+})(jQuery);
+
+(function($) {
+ var comp, by;
+
+ function init() {
+ initEvents();
+ initComparator();
+ }
+
+ function initEvents() {
+ $('a.comment-close').live("click", function(event) {
+ event.preventDefault();
+ hide($(this).attr('id').substring(2));
+ });
+ $('a.vote').live("click", function(event) {
+ event.preventDefault();
+ handleVote($(this));
+ });
+ $('a.reply').live("click", function(event) {
+ event.preventDefault();
+ openReply($(this).attr('id').substring(2));
+ });
+ $('a.close-reply').live("click", function(event) {
+ event.preventDefault();
+ closeReply($(this).attr('id').substring(2));
+ });
+ $('a.sort-option').live("click", function(event) {
+ event.preventDefault();
+ handleReSort($(this));
+ });
+ $('a.show-proposal').live("click", function(event) {
+ event.preventDefault();
+ showProposal($(this).attr('id').substring(2));
+ });
+ $('a.hide-proposal').live("click", function(event) {
+ event.preventDefault();
+ hideProposal($(this).attr('id').substring(2));
+ });
+ $('a.show-propose-change').live("click", function(event) {
+ event.preventDefault();
+ showProposeChange($(this).attr('id').substring(2));
+ });
+ $('a.hide-propose-change').live("click", function(event) {
+ event.preventDefault();
+ hideProposeChange($(this).attr('id').substring(2));
+ });
+ $('a.accept-comment').live("click", function(event) {
+ event.preventDefault();
+ acceptComment($(this).attr('id').substring(2));
+ });
+ $('a.delete-comment').live("click", function(event) {
+ event.preventDefault();
+ deleteComment($(this).attr('id').substring(2));
+ });
+ $('a.comment-markup').live("click", function(event) {
+ event.preventDefault();
+ toggleCommentMarkupBox($(this).attr('id').substring(2));
+ });
+ }
+
+ /**
+ * Set comp, which is a comparator function used for sorting and
+ * inserting comments into the list.
+ */
+ function setComparator() {
+ // If the first three letters are "asc", sort in ascending order
+ // and remove the prefix.
+ if (by.substring(0,3) == 'asc') {
+ var i = by.substring(3);
+ comp = function(a, b) { return a[i] - b[i]; };
+ } else {
+ // Otherwise sort in descending order.
+ comp = function(a, b) { return b[by] - a[by]; };
+ }
+
+ // Reset link styles and format the selected sort option.
+ $('a.sel').attr('href', '#').removeClass('sel');
+ $('a.by' + by).removeAttr('href').addClass('sel');
+ }
+
+ /**
+ * Create a comp function. If the user has preferences stored in
+ * the sortBy cookie, use those, otherwise use the default.
+ */
+ function initComparator() {
+ by = 'rating'; // Default to sort by rating.
+ // If the sortBy cookie is set, use that instead.
+ if (document.cookie.length > 0) {
+ var start = document.cookie.indexOf('sortBy=');
+ if (start != -1) {
+ start = start + 7;
+ var end = document.cookie.indexOf(";", start);
+ if (end == -1) {
+ end = document.cookie.length;
+ by = unescape(document.cookie.substring(start, end));
+ }
+ }
+ }
+ setComparator();
+ }
+
+ /**
+ * Show a comment div.
+ */
+ function show(id) {
+ $('#ao' + id).hide();
+ $('#ah' + id).show();
+ var context = $.extend({id: id}, opts);
+ var popup = $(renderTemplate(popupTemplate, context)).hide();
+ popup.find('textarea[name="proposal"]').hide();
+ popup.find('a.by' + by).addClass('sel');
+ var form = popup.find('#cf' + id);
+ form.submit(function(event) {
+ event.preventDefault();
+ addComment(form);
+ });
+ $('#s' + id).after(popup);
+ popup.slideDown('fast', function() {
+ getComments(id);
+ });
+ }
+
+ /**
+ * Hide a comment div.
+ */
+ function hide(id) {
+ $('#ah' + id).hide();
+ $('#ao' + id).show();
+ var div = $('#sc' + id);
+ div.slideUp('fast', function() {
+ div.remove();
+ });
+ }
+
+ /**
+ * Perform an ajax request to get comments for a node
+ * and insert the comments into the comments tree.
+ */
+ function getComments(id) {
+ $.ajax({
+ type: 'GET',
+ url: opts.getCommentsURL,
+ data: {node: id},
+ success: function(data, textStatus, request) {
+ var ul = $('#cl' + id);
+ var speed = 100;
+ $('#cf' + id)
+ .find('textarea[name="proposal"]')
+ .data('source', data.source);
+
+ if (data.comments.length === 0) {
+ ul.html('<li>No comments yet.</li>');
+ ul.data('empty', true);
+ } else {
+ // If there are comments, sort them and put them in the list.
+ var comments = sortComments(data.comments);
+ speed = data.comments.length * 100;
+ appendComments(comments, ul);
+ ul.data('empty', false);
+ }
+ $('#cn' + id).slideUp(speed + 200);
+ ul.slideDown(speed);
+ },
+ error: function(request, textStatus, error) {
+ showError('Oops, there was a problem retrieving the comments.');
+ },
+ dataType: 'json'
+ });
+ }
+
+ /**
+ * Add a comment via ajax and insert the comment into the comment tree.
+ */
+ function addComment(form) {
+ var node_id = form.find('input[name="node"]').val();
+ var parent_id = form.find('input[name="parent"]').val();
+ var text = form.find('textarea[name="comment"]').val();
+ var proposal = form.find('textarea[name="proposal"]').val();
+
+ if (text == '') {
+ showError('Please enter a comment.');
+ return;
+ }
+
+ // Disable the form that is being submitted.
+ form.find('textarea,input').attr('disabled', 'disabled');
+
+ // Send the comment to the server.
+ $.ajax({
+ type: "POST",
+ url: opts.addCommentURL,
+ dataType: 'json',
+ data: {
+ node: node_id,
+ parent: parent_id,
+ text: text,
+ proposal: proposal
+ },
+ success: function(data, textStatus, error) {
+ // Reset the form.
+ if (node_id) {
+ hideProposeChange(node_id);
+ }
+ form.find('textarea')
+ .val('')
+ .add(form.find('input'))
+ .removeAttr('disabled');
+ var ul = $('#cl' + (node_id || parent_id));
+ if (ul.data('empty')) {
+ $(ul).empty();
+ ul.data('empty', false);
+ }
+ insertComment(data.comment);
+ var ao = $('#ao' + node_id);
+ ao.find('img').attr({'src': opts.commentBrightImage});
+ if (node_id) {
+ // if this was a "root" comment, remove the commenting box
+ // (the user can get it back by reopening the comment popup)
+ $('#ca' + node_id).slideUp();
+ }
+ },
+ error: function(request, textStatus, error) {
+ form.find('textarea,input').removeAttr('disabled');
+ showError('Oops, there was a problem adding the comment.');
+ }
+ });
+ }
+
+ /**
+ * Recursively append comments to the main comment list and children
+ * lists, creating the comment tree.
+ */
+ function appendComments(comments, ul) {
+ $.each(comments, function() {
+ var div = createCommentDiv(this);
+ ul.append($(document.createElement('li')).html(div));
+ appendComments(this.children, div.find('ul.comment-children'));
+ // To avoid stagnating data, don't store the comments children in data.
+ this.children = null;
+ div.data('comment', this);
+ });
+ }
+
+ /**
+ * After adding a new comment, it must be inserted in the correct
+ * location in the comment tree.
+ */
+ function insertComment(comment) {
+ var div = createCommentDiv(comment);
+
+ // To avoid stagnating data, don't store the comments children in data.
+ comment.children = null;
+ div.data('comment', comment);
+
+ var ul = $('#cl' + (comment.node || comment.parent));
+ var siblings = getChildren(ul);
+
+ var li = $(document.createElement('li'));
+ li.hide();
+
+ // Determine where in the parents children list to insert this comment.
+ for(i=0; i < siblings.length; i++) {
+ if (comp(comment, siblings[i]) <= 0) {
+ $('#cd' + siblings[i].id)
+ .parent()
+ .before(li.html(div));
+ li.slideDown('fast');
+ return;
+ }
+ }
+
+ // If we get here, this comment rates lower than all the others,
+ // or it is the only comment in the list.
+ ul.append(li.html(div));
+ li.slideDown('fast');
+ }
+
+ function acceptComment(id) {
+ $.ajax({
+ type: 'POST',
+ url: opts.acceptCommentURL,
+ data: {id: id},
+ success: function(data, textStatus, request) {
+ $('#cm' + id).fadeOut('fast');
+ $('#cd' + id).removeClass('moderate');
+ },
+ error: function(request, textStatus, error) {
+ showError('Oops, there was a problem accepting the comment.');
+ }
+ });
+ }
+
+ function deleteComment(id) {
+ $.ajax({
+ type: 'POST',
+ url: opts.deleteCommentURL,
+ data: {id: id},
+ success: function(data, textStatus, request) {
+ var div = $('#cd' + id);
+ if (data == 'delete') {
+ // Moderator mode: remove the comment and all children immediately
+ div.slideUp('fast', function() {
+ div.remove();
+ });
+ return;
+ }
+ // User mode: only mark the comment as deleted
+ div
+ .find('span.user-id:first')
+ .text('[deleted]').end()
+ .find('div.comment-text:first')
+ .text('[deleted]').end()
+ .find('#cm' + id + ', #dc' + id + ', #ac' + id + ', #rc' + id +
+ ', #sp' + id + ', #hp' + id + ', #cr' + id + ', #rl' + id)
+ .remove();
+ var comment = div.data('comment');
+ comment.username = '[deleted]';
+ comment.text = '[deleted]';
+ div.data('comment', comment);
+ },
+ error: function(request, textStatus, error) {
+ showError('Oops, there was a problem deleting the comment.');
+ }
+ });
+ }
+
+ function showProposal(id) {
+ $('#sp' + id).hide();
+ $('#hp' + id).show();
+ $('#pr' + id).slideDown('fast');
+ }
+
+ function hideProposal(id) {
+ $('#hp' + id).hide();
+ $('#sp' + id).show();
+ $('#pr' + id).slideUp('fast');
+ }
+
+ function showProposeChange(id) {
+ $('#pc' + id).hide();
+ $('#hc' + id).show();
+ var textarea = $('#pt' + id);
+ textarea.val(textarea.data('source'));
+ $.fn.autogrow.resize(textarea[0]);
+ textarea.slideDown('fast');
+ }
+
+ function hideProposeChange(id) {
+ $('#hc' + id).hide();
+ $('#pc' + id).show();
+ var textarea = $('#pt' + id);
+ textarea.val('').removeAttr('disabled');
+ textarea.slideUp('fast');
+ }
+
+ function toggleCommentMarkupBox(id) {
+ $('#mb' + id).toggle();
+ }
+
+ /** Handle when the user clicks on a sort by link. */
+ function handleReSort(link) {
+ var classes = link.attr('class').split(/\s+/);
+ for (var i=0; i<classes.length; i++) {
+ if (classes[i] != 'sort-option') {
+ by = classes[i].substring(2);
+ }
+ }
+ setComparator();
+ // Save/update the sortBy cookie.
+ var expiration = new Date();
+ expiration.setDate(expiration.getDate() + 365);
+ document.cookie= 'sortBy=' + escape(by) +
+ ';expires=' + expiration.toUTCString();
+ $('ul.comment-ul').each(function(index, ul) {
+ var comments = getChildren($(ul), true);
+ comments = sortComments(comments);
+ appendComments(comments, $(ul).empty());
+ });
+ }
+
+ /**
+ * Function to process a vote when a user clicks an arrow.
+ */
+ function handleVote(link) {
+ if (!opts.voting) {
+ showError("You'll need to login to vote.");
+ return;
+ }
+
+ var id = link.attr('id');
+ if (!id) {
+ // Didn't click on one of the voting arrows.
+ return;
+ }
+ // If it is an unvote, the new vote value is 0,
+ // Otherwise it's 1 for an upvote, or -1 for a downvote.
+ var value = 0;
+ if (id.charAt(1) != 'u') {
+ value = id.charAt(0) == 'u' ? 1 : -1;
+ }
+ // The data to be sent to the server.
+ var d = {
+ comment_id: id.substring(2),
+ value: value
+ };
+
+ // Swap the vote and unvote links.
+ link.hide();
+ $('#' + id.charAt(0) + (id.charAt(1) == 'u' ? 'v' : 'u') + d.comment_id)
+ .show();
+
+ // The div the comment is displayed in.
+ var div = $('div#cd' + d.comment_id);
+ var data = div.data('comment');
+
+ // If this is not an unvote, and the other vote arrow has
+ // already been pressed, unpress it.
+ if ((d.value !== 0) && (data.vote === d.value * -1)) {
+ $('#' + (d.value == 1 ? 'd' : 'u') + 'u' + d.comment_id).hide();
+ $('#' + (d.value == 1 ? 'd' : 'u') + 'v' + d.comment_id).show();
+ }
+
+ // Update the comments rating in the local data.
+ data.rating += (data.vote === 0) ? d.value : (d.value - data.vote);
+ data.vote = d.value;
+ div.data('comment', data);
+
+ // Change the rating text.
+ div.find('.rating:first')
+ .text(data.rating + ' point' + (data.rating == 1 ? '' : 's'));
+
+ // Send the vote information to the server.
+ $.ajax({
+ type: "POST",
+ url: opts.processVoteURL,
+ data: d,
+ error: function(request, textStatus, error) {
+ showError('Oops, there was a problem casting that vote.');
+ }
+ });
+ }
+
+ /**
+ * Open a reply form used to reply to an existing comment.
+ */
+ function openReply(id) {
+ // Swap out the reply link for the hide link
+ $('#rl' + id).hide();
+ $('#cr' + id).show();
+
+ // Add the reply li to the children ul.
+ var div = $(renderTemplate(replyTemplate, {id: id})).hide();
+ $('#cl' + id)
+ .prepend(div)
+ // Setup the submit handler for the reply form.
+ .find('#rf' + id)
+ .submit(function(event) {
+ event.preventDefault();
+ addComment($('#rf' + id));
+ closeReply(id);
+ })
+ .find('input[type=button]')
+ .click(function() {
+ closeReply(id);
+ });
+ div.slideDown('fast', function() {
+ $('#rf' + id).find('textarea').focus();
+ });
+ }
+
+ /**
+ * Close the reply form opened with openReply.
+ */
+ function closeReply(id) {
+ // Remove the reply div from the DOM.
+ $('#rd' + id).slideUp('fast', function() {
+ $(this).remove();
+ });
+
+ // Swap out the hide link for the reply link
+ $('#cr' + id).hide();
+ $('#rl' + id).show();
+ }
+
+ /**
+ * Recursively sort a tree of comments using the comp comparator.
+ */
+ function sortComments(comments) {
+ comments.sort(comp);
+ $.each(comments, function() {
+ this.children = sortComments(this.children);
+ });
+ return comments;
+ }
+
+ /**
+ * Get the children comments from a ul. If recursive is true,
+ * recursively include childrens' children.
+ */
+ function getChildren(ul, recursive) {
+ var children = [];
+ ul.children().children("[id^='cd']")
+ .each(function() {
+ var comment = $(this).data('comment');
+ if (recursive)
+ comment.children = getChildren($(this).find('#cl' + comment.id), true);
+ children.push(comment);
+ });
+ return children;
+ }
+
+ /** Create a div to display a comment in. */
+ function createCommentDiv(comment) {
+ if (!comment.displayed && !opts.moderator) {
+ return $('<div class="moderate">Thank you! Your comment will show up '
+ + 'once it is has been approved by a moderator.</div>');
+ }
+ // Prettify the comment rating.
+ comment.pretty_rating = comment.rating + ' point' +
+ (comment.rating == 1 ? '' : 's');
+ // Make a class (for displaying not yet moderated comments differently)
+ comment.css_class = comment.displayed ? '' : ' moderate';
+ // Create a div for this comment.
+ var context = $.extend({}, opts, comment);
+ var div = $(renderTemplate(commentTemplate, context));
+
+ // If the user has voted on this comment, highlight the correct arrow.
+ if (comment.vote) {
+ var direction = (comment.vote == 1) ? 'u' : 'd';
+ div.find('#' + direction + 'v' + comment.id).hide();
+ div.find('#' + direction + 'u' + comment.id).show();
+ }
+
+ if (opts.moderator || comment.text != '[deleted]') {
+ div.find('a.reply').show();
+ if (comment.proposal_diff)
+ div.find('#sp' + comment.id).show();
+ if (opts.moderator && !comment.displayed)
+ div.find('#cm' + comment.id).show();
+ if (opts.moderator || (opts.username == comment.username))
+ div.find('#dc' + comment.id).show();
+ }
+ return div;
+ }
+
+ /**
+ * A simple template renderer. Placeholders such as <%id%> are replaced
+ * by context['id'] with items being escaped. Placeholders such as <#id#>
+ * are not escaped.
+ */
+ function renderTemplate(template, context) {
+ var esc = $(document.createElement('div'));
+
+ function handle(ph, escape) {
+ var cur = context;
+ $.each(ph.split('.'), function() {
+ cur = cur[this];
+ });
+ return escape ? esc.text(cur || "").html() : cur;
+ }
+
+ return template.replace(/<([%#])([\w\.]*)\1>/g, function() {
+ return handle(arguments[2], arguments[1] == '%' ? true : false);
+ });
+ }
+
+ /** Flash an error message briefly. */
+ function showError(message) {
+ $(document.createElement('div')).attr({'class': 'popup-error'})
+ .append($(document.createElement('div'))
+ .attr({'class': 'error-message'}).text(message))
+ .appendTo('body')
+ .fadeIn("slow")
+ .delay(2000)
+ .fadeOut("slow");
+ }
+
+ /** Add a link the user uses to open the comments popup. */
+ $.fn.comment = function() {
+ return this.each(function() {
+ var id = $(this).attr('id').substring(1);
+ var count = COMMENT_METADATA[id];
+ var title = count + ' comment' + (count == 1 ? '' : 's');
+ var image = count > 0 ? opts.commentBrightImage : opts.commentImage;
+ var addcls = count == 0 ? ' nocomment' : '';
+ $(this)
+ .append(
+ $(document.createElement('a')).attr({
+ href: '#',
+ 'class': 'sphinx-comment-open' + addcls,
+ id: 'ao' + id
+ })
+ .append($(document.createElement('img')).attr({
+ src: image,
+ alt: 'comment',
+ title: title
+ }))
+ .click(function(event) {
+ event.preventDefault();
+ show($(this).attr('id').substring(2));
+ })
+ )
+ .append(
+ $(document.createElement('a')).attr({
+ href: '#',
+ 'class': 'sphinx-comment-close hidden',
+ id: 'ah' + id
+ })
+ .append($(document.createElement('img')).attr({
+ src: opts.closeCommentImage,
+ alt: 'close',
+ title: 'close'
+ }))
+ .click(function(event) {
+ event.preventDefault();
+ hide($(this).attr('id').substring(2));
+ })
+ );
+ });
+ };
+
+ var opts = {
+ processVoteURL: '/_process_vote',
+ addCommentURL: '/_add_comment',
+ getCommentsURL: '/_get_comments',
+ acceptCommentURL: '/_accept_comment',
+ deleteCommentURL: '/_delete_comment',
+ commentImage: '/static/_static/comment.png',
+ closeCommentImage: '/static/_static/comment-close.png',
+ loadingImage: '/static/_static/ajax-loader.gif',
+ commentBrightImage: '/static/_static/comment-bright.png',
+ upArrow: '/static/_static/up.png',
+ downArrow: '/static/_static/down.png',
+ upArrowPressed: '/static/_static/up-pressed.png',
+ downArrowPressed: '/static/_static/down-pressed.png',
+ voting: false,
+ moderator: false
+ };
+
+ if (typeof COMMENT_OPTIONS != "undefined") {
+ opts = jQuery.extend(opts, COMMENT_OPTIONS);
+ }
+
+ var popupTemplate = '\
+ <div class="sphinx-comments" id="sc<%id%>">\
+ <p class="sort-options">\
+ Sort by:\
+ <a href="#" class="sort-option byrating">best rated</a>\
+ <a href="#" class="sort-option byascage">newest</a>\
+ <a href="#" class="sort-option byage">oldest</a>\
+ </p>\
+ <div class="comment-header">Comments</div>\
+ <div class="comment-loading" id="cn<%id%>">\
+ loading comments... <img src="<%loadingImage%>" alt="" /></div>\
+ <ul id="cl<%id%>" class="comment-ul"></ul>\
+ <div id="ca<%id%>">\
+ <p class="add-a-comment">Add a comment\
+ (<a href="#" class="comment-markup" id="ab<%id%>">markup</a>):</p>\
+ <div class="comment-markup-box" id="mb<%id%>">\
+ reStructured text markup: <i>*emph*</i>, <b>**strong**</b>, \
+ <tt>``code``</tt>, \
+ code blocks: <tt>::</tt> and an indented block after blank line</div>\
+ <form method="post" id="cf<%id%>" class="comment-form" action="">\
+ <textarea name="comment" cols="80"></textarea>\
+ <p class="propose-button">\
+ <a href="#" id="pc<%id%>" class="show-propose-change">\
+ Propose a change &#9657;\
+ </a>\
+ <a href="#" id="hc<%id%>" class="hide-propose-change">\
+ Propose a change &#9663;\
+ </a>\
+ </p>\
+ <textarea name="proposal" id="pt<%id%>" cols="80"\
+ spellcheck="false"></textarea>\
+ <input type="submit" value="Add comment" />\
+ <input type="hidden" name="node" value="<%id%>" />\
+ <input type="hidden" name="parent" value="" />\
+ </form>\
+ </div>\
+ </div>';
+
+ var commentTemplate = '\
+ <div id="cd<%id%>" class="sphinx-comment<%css_class%>">\
+ <div class="vote">\
+ <div class="arrow">\
+ <a href="#" id="uv<%id%>" class="vote" title="vote up">\
+ <img src="<%upArrow%>" />\
+ </a>\
+ <a href="#" id="uu<%id%>" class="un vote" title="vote up">\
+ <img src="<%upArrowPressed%>" />\
+ </a>\
+ </div>\
+ <div class="arrow">\
+ <a href="#" id="dv<%id%>" class="vote" title="vote down">\
+ <img src="<%downArrow%>" id="da<%id%>" />\
+ </a>\
+ <a href="#" id="du<%id%>" class="un vote" title="vote down">\
+ <img src="<%downArrowPressed%>" />\
+ </a>\
+ </div>\
+ </div>\
+ <div class="comment-content">\
+ <p class="tagline comment">\
+ <span class="user-id"><%username%></span>\
+ <span class="rating"><%pretty_rating%></span>\
+ <span class="delta"><%time.delta%></span>\
+ </p>\
+ <div class="comment-text comment"><#text#></div>\
+ <p class="comment-opts comment">\
+ <a href="#" class="reply hidden" id="rl<%id%>">reply &#9657;</a>\
+ <a href="#" class="close-reply" id="cr<%id%>">reply &#9663;</a>\
+ <a href="#" id="sp<%id%>" class="show-proposal">proposal &#9657;</a>\
+ <a href="#" id="hp<%id%>" class="hide-proposal">proposal &#9663;</a>\
+ <a href="#" id="dc<%id%>" class="delete-comment hidden">delete</a>\
+ <span id="cm<%id%>" class="moderation hidden">\
+ <a href="#" id="ac<%id%>" class="accept-comment">accept</a>\
+ </span>\
+ </p>\
+ <pre class="proposal" id="pr<%id%>">\
+<#proposal_diff#>\
+ </pre>\
+ <ul class="comment-children" id="cl<%id%>"></ul>\
+ </div>\
+ <div class="clearleft"></div>\
+ </div>\
+ </div>';
+
+ var replyTemplate = '\
+ <li>\
+ <div class="reply-div" id="rd<%id%>">\
+ <form id="rf<%id%>">\
+ <textarea name="comment" cols="80"></textarea>\
+ <input type="submit" value="Add reply" />\
+ <input type="button" value="Cancel" />\
+ <input type="hidden" name="parent" value="<%id%>" />\
+ <input type="hidden" name="node" value="" />\
+ </form>\
+ </div>\
+ </li>';
+
+ $(document).ready(function() {
+ init();
+ });
+})(jQuery);
+
+$(document).ready(function() {
+ // add comment anchors for all paragraphs that are commentable
+ $('.sphinx-has-comment').comment();
+
+ // highlight search words in search results
+ $("div.context").each(function() {
+ var params = $.getQueryParameters();
+ var terms = (params.q) ? params.q[0].split(/\s+/) : [];
+ var result = $(this);
+ $.each(terms, function() {
+ result.highlightText(this.toLowerCase(), 'highlighted');
+ });
+ });
+
+ // directly open comment window if requested
+ var anchor = document.location.hash;
+ if (anchor.substring(0, 9) == '#comment-') {
+ $('#ao' + anchor.substring(9)).click();
+ document.location.hash = '#s' + anchor.substring(9);
+ }
+});
diff --git a/python/altgraph/doc/_build/html/changelog.html b/python/altgraph/doc/_build/html/changelog.html
new file mode 100644
index 000000000..8f0f459ea
--- /dev/null
+++ b/python/altgraph/doc/_build/html/changelog.html
@@ -0,0 +1,271 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
+
+<html xmlns="http://www.w3.org/1999/xhtml">
+ <head>
+ <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+
+ <title>Release history &mdash; altgraph 0.11 documentation</title>
+
+ <link rel="stylesheet" href="_static/nature.css" type="text/css" />
+ <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
+
+ <script type="text/javascript">
+ var DOCUMENTATION_OPTIONS = {
+ URL_ROOT: './',
+ VERSION: '0.11',
+ COLLAPSE_INDEX: false,
+ FILE_SUFFIX: '.html',
+ HAS_SOURCE: true
+ };
+ </script>
+ <script type="text/javascript" src="_static/jquery.js"></script>
+ <script type="text/javascript" src="_static/underscore.js"></script>
+ <script type="text/javascript" src="_static/doctools.js"></script>
+ <link rel="top" title="altgraph 0.11 documentation" href="index.html" />
+ <link rel="next" title="License" href="license.html" />
+ <link rel="prev" title="Altgraph - A basic graph library" href="index.html" />
+ </head>
+ <body>
+ <div class="related">
+ <h3>Navigation</h3>
+ <ul>
+ <li class="right" style="margin-right: 10px">
+ <a href="genindex.html" title="General Index"
+ accesskey="I">index</a></li>
+ <li class="right" >
+ <a href="py-modindex.html" title="Python Module Index"
+ >modules</a> |</li>
+ <li class="right" >
+ <a href="license.html" title="License"
+ accesskey="N">next</a> |</li>
+ <li class="right" >
+ <a href="index.html" title="Altgraph - A basic graph library"
+ accesskey="P">previous</a> |</li>
+ <li><a href="index.html">altgraph 0.11 documentation</a> &raquo;</li>
+ </ul>
+ </div>
+
+ <div class="document">
+ <div class="documentwrapper">
+ <div class="bodywrapper">
+ <div class="body">
+
+ <div class="section" id="release-history">
+<h1>Release history<a class="headerlink" href="#release-history" title="Permalink to this headline">¶</a></h1>
+<div class="section" id="id1">
+<h2>0.11<a class="headerlink" href="#id1" title="Permalink to this headline">¶</a></h2>
+<ul class="simple">
+<li>Stabilize the order of elements in dot file exports,
+patch from bitbucket user &#8216;pombredanne&#8217;.</li>
+<li>Tweak setup.py file to remove dependency on distribute (but
+keep the dependency on setuptools)</li>
+</ul>
+</div>
+<div class="section" id="id2">
+<h2>0.10.2<a class="headerlink" href="#id2" title="Permalink to this headline">¶</a></h2>
+<ul class="simple">
+<li>There where no classifiers in the package metadata due to a bug
+in setup.py</li>
+</ul>
+</div>
+<div class="section" id="id3">
+<h2>0.10.1<a class="headerlink" href="#id3" title="Permalink to this headline">¶</a></h2>
+<p>This is a bugfix release</p>
+<p>Bug fixes:</p>
+<ul>
+<li><p class="first">Issue #3: The source archive contains a README.txt
+while the setup file refers to ReadMe.txt.</p>
+<p>This is caused by a misfeature in distutils, as a
+workaround I&#8217;ve renamed ReadMe.txt to README.txt
+in the source tree and setup file.</p>
+</li>
+</ul>
+</div>
+<div class="section" id="id4">
+<h2>0.10<a class="headerlink" href="#id4" title="Permalink to this headline">¶</a></h2>
+<p>This is a minor feature release</p>
+<p>Features:</p>
+<ul>
+<li><p class="first">Do not use &#8220;2to3&#8221; to support Python 3.</p>
+<p>As a side effect of this altgraph now supports
+Python 2.6 and later, and no longer supports
+earlier releases of Python.</p>
+</li>
+<li><p class="first">The order of attributes in the Dot output
+is now always alphabetical.</p>
+<p>With this change the output will be consistent
+between runs and Python versions.</p>
+</li>
+</ul>
+</div>
+<div class="section" id="id5">
+<h2>0.9<a class="headerlink" href="#id5" title="Permalink to this headline">¶</a></h2>
+<p>This is a minor bugfix release</p>
+<p>Features:</p>
+<ul class="simple">
+<li>Added <tt class="docutils literal"><span class="pre">altgraph.ObjectGraph.ObjectGraph.nodes</span></tt>, a method
+yielding all nodes in an object graph.</li>
+</ul>
+<p>Bugfixes:</p>
+<ul class="simple">
+<li>The 0.8 release didn&#8217;t work with py2app when using
+python 3.x.</li>
+</ul>
+</div>
+<div class="section" id="id6">
+<h2>0.8<a class="headerlink" href="#id6" title="Permalink to this headline">¶</a></h2>
+<p>This is a minor feature release. The major new feature
+is a extensive set of unittests, which explains almost
+all other changes in this release.</p>
+<p>Bugfixes:</p>
+<ul class="simple">
+<li>Installing failed with Python 2.5 due to using a distutils
+class that isn&#8217;t available in that version of Python
+(issue #1 on the issue tracker)</li>
+<li><tt class="docutils literal"><span class="pre">altgraph.GraphStat.degree_dist</span></tt> now actually works</li>
+<li><tt class="docutils literal"><span class="pre">altgraph.Graph.add_edge(a,</span> <span class="pre">b,</span> <span class="pre">create_nodes=False)</span></tt> will
+no longer create the edge when one of the nodes doesn&#8217;t
+exist.</li>
+<li><tt class="docutils literal"><span class="pre">altgraph.Graph.forw_topo_sort</span></tt> failed for some sparse graphs.</li>
+<li><tt class="docutils literal"><span class="pre">altgraph.Graph.back_topo_sort</span></tt> was completely broken in
+previous releases.</li>
+<li><tt class="docutils literal"><span class="pre">altgraph.Graph.forw_bfs_subgraph</span></tt> now actually works.</li>
+<li><tt class="docutils literal"><span class="pre">altgraph.Graph.back_bfs_subgraph</span></tt> now actually works.</li>
+<li><tt class="docutils literal"><span class="pre">altgraph.Graph.iterdfs</span></tt> now returns the correct result
+when the <tt class="docutils literal"><span class="pre">forward</span></tt> argument is <tt class="docutils literal"><span class="pre">False</span></tt>.</li>
+<li><tt class="docutils literal"><span class="pre">altgraph.Graph.iterdata</span></tt> now returns the correct result
+when the <tt class="docutils literal"><span class="pre">forward</span></tt> argument is <tt class="docutils literal"><span class="pre">False</span></tt>.</li>
+</ul>
+<p>Features:</p>
+<ul class="simple">
+<li>The <tt class="docutils literal"><span class="pre">altgraph.Graph</span></tt> constructor now accepts an argument
+that contains 2- and 3-tuples instead of requireing that
+all items have the same size. The (optional) argument can now
+also be any iterator.</li>
+<li><tt class="docutils literal"><span class="pre">altgraph.Graph.Graph.add_node</span></tt> has no effect when you
+add a hidden node.</li>
+<li>The private method <tt class="docutils literal"><span class="pre">altgraph.Graph._bfs</span></tt> is no longer
+present.</li>
+<li>The private method <tt class="docutils literal"><span class="pre">altgraph.Graph._dfs</span></tt> is no longer
+present.</li>
+<li><tt class="docutils literal"><span class="pre">altgraph.ObjectGraph</span></tt> now has a <tt class="docutils literal"><span class="pre">__contains__</span></tt> methods,
+which means you can use the <tt class="docutils literal"><span class="pre">in</span></tt> operator to check if a
+node is part of a graph.</li>
+<li><tt class="docutils literal"><span class="pre">altgraph.GraphUtil.generate_random_graph</span></tt> will raise
+<tt class="docutils literal"><span class="pre">GraphError</span></tt> instead of looping forever when it is
+impossible to create the requested graph.</li>
+<li><tt class="docutils literal"><span class="pre">altgraph.Dot.edge_style</span></tt> raises <tt class="docutils literal"><span class="pre">GraphError</span></tt> when
+one of the nodes is not present in the graph. The method
+silently added the tail in the past, but without ensuring
+a consistent graph state.</li>
+<li><tt class="docutils literal"><span class="pre">altgraph.Dot.save_img</span></tt> now works when the mode is
+<tt class="docutils literal"><span class="pre">&quot;neato&quot;</span></tt>.</li>
+</ul>
+</div>
+<div class="section" id="id7">
+<h2>0.7.2<a class="headerlink" href="#id7" title="Permalink to this headline">¶</a></h2>
+<p>This is a minor bugfix release</p>
+<p>Bugfixes:</p>
+<ul class="simple">
+<li>distutils didn&#8217;t include the documentation subtree</li>
+</ul>
+</div>
+<div class="section" id="id8">
+<h2>0.7.1<a class="headerlink" href="#id8" title="Permalink to this headline">¶</a></h2>
+<p>This is a minor feature release</p>
+<p>Features:</p>
+<ul class="simple">
+<li>Documentation is now generated using <a class="reference external" href="http://pypi.python.org/pypi/sphinx">sphinx</a>
+and can be viewed at &lt;<a class="reference external" href="http://packages.python.org/altgraph">http://packages.python.org/altgraph</a>&gt;.</li>
+<li>The repository has moved to bitbucket</li>
+<li><tt class="docutils literal"><span class="pre">altgraph.GraphStat.avg_hops</span></tt> is no longer present, the function had no
+implementation and no specified behaviour.</li>
+<li>the module <tt class="docutils literal"><span class="pre">altgraph.compat</span></tt> is gone, which means altgraph will no
+longer work with Python 2.3.</li>
+</ul>
+</div>
+<div class="section" id="id9">
+<h2>0.7.0<a class="headerlink" href="#id9" title="Permalink to this headline">¶</a></h2>
+<p>This is a minor feature release.</p>
+<p>Features:</p>
+<ul>
+<li><p class="first">Support for Python 3</p>
+</li>
+<li><p class="first">It is now possible to run tests using &#8216;python setup.py test&#8217;</p>
+<p>(The actual testsuite is still very minimal though)</p>
+</li>
+</ul>
+</div>
+</div>
+
+
+ </div>
+ </div>
+ </div>
+ <div class="sphinxsidebar">
+ <div class="sphinxsidebarwrapper">
+ <h3><a href="index.html">Table Of Contents</a></h3>
+ <ul>
+<li><a class="reference internal" href="#">Release history</a><ul>
+<li><a class="reference internal" href="#id1">0.11</a></li>
+<li><a class="reference internal" href="#id2">0.10.2</a></li>
+<li><a class="reference internal" href="#id3">0.10.1</a></li>
+<li><a class="reference internal" href="#id4">0.10</a></li>
+<li><a class="reference internal" href="#id5">0.9</a></li>
+<li><a class="reference internal" href="#id6">0.8</a></li>
+<li><a class="reference internal" href="#id7">0.7.2</a></li>
+<li><a class="reference internal" href="#id8">0.7.1</a></li>
+<li><a class="reference internal" href="#id9">0.7.0</a></li>
+</ul>
+</li>
+</ul>
+
+ <h4>Previous topic</h4>
+ <p class="topless"><a href="index.html"
+ title="previous chapter">Altgraph - A basic graph library</a></p>
+ <h4>Next topic</h4>
+ <p class="topless"><a href="license.html"
+ title="next chapter">License</a></p>
+<div id="searchbox" style="display: none">
+ <h3>Quick search</h3>
+ <form class="search" action="search.html" method="get">
+ <input type="text" name="q" />
+ <input type="submit" value="Go" />
+ <input type="hidden" name="check_keywords" value="yes" />
+ <input type="hidden" name="area" value="default" />
+ </form>
+ <p class="searchtip" style="font-size: 90%">
+ Enter search terms or a module, class or function name.
+ </p>
+</div>
+<script type="text/javascript">$('#searchbox').show(0);</script>
+ </div>
+ </div>
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+ </div>
+ <div class="related">
+ <h3>Navigation</h3>
+ <ul>
+ <li class="right" style="margin-right: 10px">
+ <a href="genindex.html" title="General Index"
+ >index</a></li>
+ <li class="right" >
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+ >modules</a> |</li>
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+ <li><a href="index.html">altgraph 0.11 documentation</a> &raquo;</li>
+ </ul>
+ </div>
+ <div class="footer">
+ &copy; Copyright 2010-2011, Ronald Oussoren, Bob Ippolito, 2004 Istvan Albert.
+ Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.1.
+ </div>
+ </body>
+</html> \ No newline at end of file
diff --git a/python/altgraph/doc/_build/html/core.html b/python/altgraph/doc/_build/html/core.html
new file mode 100644
index 000000000..3d2ee1737
--- /dev/null
+++ b/python/altgraph/doc/_build/html/core.html
@@ -0,0 +1,130 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
+
+<html xmlns="http://www.w3.org/1999/xhtml">
+ <head>
+ <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+
+ <title>altgraph — A Python Graph Library &mdash; altgraph 0.11 documentation</title>
+
+ <link rel="stylesheet" href="_static/nature.css" type="text/css" />
+ <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
+
+ <script type="text/javascript">
+ var DOCUMENTATION_OPTIONS = {
+ URL_ROOT: './',
+ VERSION: '0.11',
+ COLLAPSE_INDEX: false,
+ FILE_SUFFIX: '.html',
+ HAS_SOURCE: true
+ };
+ </script>
+ <script type="text/javascript" src="_static/jquery.js"></script>
+ <script type="text/javascript" src="_static/underscore.js"></script>
+ <script type="text/javascript" src="_static/doctools.js"></script>
+ <link rel="top" title="altgraph 0.11 documentation" href="index.html" />
+ <link rel="next" title="altgraph.Graph — Basic directional graphs" href="graph.html" />
+ <link rel="prev" title="License" href="license.html" />
+ </head>
+ <body>
+ <div class="related">
+ <h3>Navigation</h3>
+ <ul>
+ <li class="right" style="margin-right: 10px">
+ <a href="genindex.html" title="General Index"
+ accesskey="I">index</a></li>
+ <li class="right" >
+ <a href="py-modindex.html" title="Python Module Index"
+ >modules</a> |</li>
+ <li class="right" >
+ <a href="graph.html" title="altgraph.Graph — Basic directional graphs"
+ accesskey="N">next</a> |</li>
+ <li class="right" >
+ <a href="license.html" title="License"
+ accesskey="P">previous</a> |</li>
+ <li><a href="index.html">altgraph 0.11 documentation</a> &raquo;</li>
+ </ul>
+ </div>
+
+ <div class="document">
+ <div class="documentwrapper">
+ <div class="bodywrapper">
+ <div class="body">
+
+ <div class="section" id="module-altgraph">
+<span id="altgraph-a-python-graph-library"></span><h1><a class="reference internal" href="#module-altgraph" title="altgraph: A directional graph for python"><tt class="xref py py-mod docutils literal"><span class="pre">altgraph</span></tt></a> &#8212; A Python Graph Library<a class="headerlink" href="#module-altgraph" title="Permalink to this headline">¶</a></h1>
+<p>altgraph is a fork of <a class="reference external" href="http://pygraphlib.sourceforge.net">graphlib</a> tailored
+to use newer Python 2.3+ features, including additional support used by the
+py2app suite (modulegraph and macholib, specifically).</p>
+<p>altgraph is a python based graph (network) representation and manipulation package.
+It has started out as an extension to the <a class="reference external" href="http://www.ece.arizona.edu/~denny/python_nest/graph_lib_1.0.1.html">graph_lib module</a>
+written by Nathan Denny it has been significantly optimized and expanded.</p>
+<p>The <a class="reference internal" href="graph.html#altgraph.Graph.Graph" title="altgraph.Graph.Graph"><tt class="xref py py-class docutils literal"><span class="pre">altgraph.Graph.Graph</span></tt></a> class is loosely modeled after the <a class="reference external" href="http://www.algorithmic-solutions.com/enleda.htm">LEDA</a>
+(Library of Efficient Datatypes) representation. The library
+includes methods for constructing graphs, BFS and DFS traversals,
+topological sort, finding connected components, shortest paths as well as a number
+graph statistics functions. The library can also visualize graphs
+via <a class="reference external" href="http://www.research.att.com/sw/tools/graphviz/">graphviz</a>.</p>
+<dl class="exception">
+<dt id="altgraph.GraphError">
+<em class="property">exception </em><tt class="descclassname">altgraph.</tt><tt class="descname">GraphError</tt><a class="headerlink" href="#altgraph.GraphError" title="Permalink to this definition">¶</a></dt>
+<dd><p>Exception raised when methods are called with bad values of
+an inconsistent state.</p>
+</dd></dl>
+
+</div>
+
+
+ </div>
+ </div>
+ </div>
+ <div class="sphinxsidebar">
+ <div class="sphinxsidebarwrapper">
+ <h4>Previous topic</h4>
+ <p class="topless"><a href="license.html"
+ title="previous chapter">License</a></p>
+ <h4>Next topic</h4>
+ <p class="topless"><a href="graph.html"
+ title="next chapter"><tt class="docutils literal"><span class="pre">altgraph.Graph</span></tt> &#8212; Basic directional graphs</a></p>
+<div id="searchbox" style="display: none">
+ <h3>Quick search</h3>
+ <form class="search" action="search.html" method="get">
+ <input type="text" name="q" />
+ <input type="submit" value="Go" />
+ <input type="hidden" name="check_keywords" value="yes" />
+ <input type="hidden" name="area" value="default" />
+ </form>
+ <p class="searchtip" style="font-size: 90%">
+ Enter search terms or a module, class or function name.
+ </p>
+</div>
+<script type="text/javascript">$('#searchbox').show(0);</script>
+ </div>
+ </div>
+ <div class="clearer"></div>
+ </div>
+ <div class="related">
+ <h3>Navigation</h3>
+ <ul>
+ <li class="right" style="margin-right: 10px">
+ <a href="genindex.html" title="General Index"
+ >index</a></li>
+ <li class="right" >
+ <a href="py-modindex.html" title="Python Module Index"
+ >modules</a> |</li>
+ <li class="right" >
+ <a href="graph.html" title="altgraph.Graph — Basic directional graphs"
+ >next</a> |</li>
+ <li class="right" >
+ <a href="license.html" title="License"
+ >previous</a> |</li>
+ <li><a href="index.html">altgraph 0.11 documentation</a> &raquo;</li>
+ </ul>
+ </div>
+ <div class="footer">
+ &copy; Copyright 2010-2011, Ronald Oussoren, Bob Ippolito, 2004 Istvan Albert.
+ Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.1.
+ </div>
+ </body>
+</html> \ No newline at end of file
diff --git a/python/altgraph/doc/_build/html/dot.html b/python/altgraph/doc/_build/html/dot.html
new file mode 100644
index 000000000..87fabc077
--- /dev/null
+++ b/python/altgraph/doc/_build/html/dot.html
@@ -0,0 +1,332 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
+
+<html xmlns="http://www.w3.org/1999/xhtml">
+ <head>
+ <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+
+ <title>altgraph.Dot — Interface to the dot language &mdash; altgraph 0.11 documentation</title>
+
+ <link rel="stylesheet" href="_static/nature.css" type="text/css" />
+ <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
+
+ <script type="text/javascript">
+ var DOCUMENTATION_OPTIONS = {
+ URL_ROOT: './',
+ VERSION: '0.11',
+ COLLAPSE_INDEX: false,
+ FILE_SUFFIX: '.html',
+ HAS_SOURCE: true
+ };
+ </script>
+ <script type="text/javascript" src="_static/jquery.js"></script>
+ <script type="text/javascript" src="_static/underscore.js"></script>
+ <script type="text/javascript" src="_static/doctools.js"></script>
+ <link rel="top" title="altgraph 0.11 documentation" href="index.html" />
+ <link rel="prev" title="altgraph.GraphUtil — Utility functions" href="graphutil.html" />
+ </head>
+ <body>
+ <div class="related">
+ <h3>Navigation</h3>
+ <ul>
+ <li class="right" style="margin-right: 10px">
+ <a href="genindex.html" title="General Index"
+ accesskey="I">index</a></li>
+ <li class="right" >
+ <a href="py-modindex.html" title="Python Module Index"
+ >modules</a> |</li>
+ <li class="right" >
+ <a href="graphutil.html" title="altgraph.GraphUtil — Utility functions"
+ accesskey="P">previous</a> |</li>
+ <li><a href="index.html">altgraph 0.11 documentation</a> &raquo;</li>
+ </ul>
+ </div>
+
+ <div class="document">
+ <div class="documentwrapper">
+ <div class="bodywrapper">
+ <div class="body">
+
+ <div class="section" id="module-altgraph.Dot">
+<span id="altgraph-dot-interface-to-the-dot-language"></span><h1><a class="reference internal" href="#module-altgraph.Dot" title="altgraph.Dot: Interface to the dot language as used by Graphviz.."><tt class="xref py py-mod docutils literal"><span class="pre">altgraph.Dot</span></tt></a> &#8212; Interface to the dot language<a class="headerlink" href="#module-altgraph.Dot" title="Permalink to this headline">¶</a></h1>
+<p>The <a class="reference internal" href="#module-altgraph.Dot" title="altgraph.Dot: Interface to the dot language as used by Graphviz.."><tt class="xref py py-mod docutils literal"><span class="pre">Dot</span></tt></a> module provides a simple interface to the
+file format used in the <a class="reference external" href="&lt;http://www.research.att.com/sw/tools/graphviz/&gt;`_">graphviz</a> program. The module is intended to
+offload the most tedious part of the process (the <strong>dot</strong> file generation)
+while transparently exposing most of its features.</p>
+<p>To display the graphs or to generate image files the <a class="reference external" href="&lt;http://www.research.att.com/sw/tools/graphviz/&gt;`_">graphviz</a>
+package needs to be installed on the system, moreover the <strong class="command">dot</strong> and <strong class="command">dotty</strong> programs must
+be accesible in the program path so that they can be ran from processes spawned
+within the module.</p>
+<div class="section" id="example-usage">
+<h2>Example usage<a class="headerlink" href="#example-usage" title="Permalink to this headline">¶</a></h2>
+<p>Here is a typical usage:</p>
+<div class="highlight-python"><div class="highlight"><pre><span class="kn">from</span> <span class="nn">altgraph</span> <span class="kn">import</span> <span class="n">Graph</span><span class="p">,</span> <span class="n">Dot</span>
+
+<span class="c"># create a graph</span>
+<span class="n">edges</span> <span class="o">=</span> <span class="p">[</span> <span class="p">(</span><span class="mi">1</span><span class="p">,</span><span class="mi">2</span><span class="p">),</span> <span class="p">(</span><span class="mi">1</span><span class="p">,</span><span class="mi">3</span><span class="p">),</span> <span class="p">(</span><span class="mi">3</span><span class="p">,</span><span class="mi">4</span><span class="p">),</span> <span class="p">(</span><span class="mi">3</span><span class="p">,</span><span class="mi">5</span><span class="p">),</span> <span class="p">(</span><span class="mi">4</span><span class="p">,</span><span class="mi">5</span><span class="p">),</span> <span class="p">(</span><span class="mi">5</span><span class="p">,</span><span class="mi">4</span><span class="p">)</span> <span class="p">]</span>
+<span class="n">graph</span> <span class="o">=</span> <span class="n">Graph</span><span class="o">.</span><span class="n">Graph</span><span class="p">(</span><span class="n">edges</span><span class="p">)</span>
+
+<span class="c"># create a dot representation of the graph</span>
+<span class="n">dot</span> <span class="o">=</span> <span class="n">Dot</span><span class="o">.</span><span class="n">Dot</span><span class="p">(</span><span class="n">graph</span><span class="p">)</span>
+
+<span class="c"># display the graph</span>
+<span class="n">dot</span><span class="o">.</span><span class="n">display</span><span class="p">()</span>
+
+<span class="c"># save the dot representation into the mydot.dot file</span>
+<span class="n">dot</span><span class="o">.</span><span class="n">save_dot</span><span class="p">(</span><span class="n">file_name</span><span class="o">=</span><span class="s">&#39;mydot.dot&#39;</span><span class="p">)</span>
+
+<span class="c"># save dot file as gif image into the graph.gif file</span>
+<span class="n">dot</span><span class="o">.</span><span class="n">save_img</span><span class="p">(</span><span class="n">file_name</span><span class="o">=</span><span class="s">&#39;graph&#39;</span><span class="p">,</span> <span class="n">file_type</span><span class="o">=</span><span class="s">&#39;gif&#39;</span><span class="p">)</span>
+</pre></div>
+</div>
+</div>
+<div class="section" id="directed-graph-and-non-directed-graph">
+<h2>Directed graph and non-directed graph<a class="headerlink" href="#directed-graph-and-non-directed-graph" title="Permalink to this headline">¶</a></h2>
+<p>Dot class can use for both directed graph and non-directed graph
+by passing <em>graphtype</em> parameter.</p>
+<p>Example:</p>
+<div class="highlight-python"><div class="highlight"><pre><span class="c"># create directed graph(default)</span>
+<span class="n">dot</span> <span class="o">=</span> <span class="n">Dot</span><span class="o">.</span><span class="n">Dot</span><span class="p">(</span><span class="n">graph</span><span class="p">,</span> <span class="n">graphtype</span><span class="o">=</span><span class="s">&quot;digraph&quot;</span><span class="p">)</span>
+
+<span class="c"># create non-directed graph</span>
+<span class="n">dot</span> <span class="o">=</span> <span class="n">Dot</span><span class="o">.</span><span class="n">Dot</span><span class="p">(</span><span class="n">graph</span><span class="p">,</span> <span class="n">graphtype</span><span class="o">=</span><span class="s">&quot;graph&quot;</span><span class="p">)</span>
+</pre></div>
+</div>
+</div>
+<div class="section" id="customizing-the-output">
+<h2>Customizing the output<a class="headerlink" href="#customizing-the-output" title="Permalink to this headline">¶</a></h2>
+<p>The graph drawing process may be customized by passing
+valid <strong class="command">dot</strong> parameters for the nodes and edges. For a list of all
+parameters see the <a class="reference external" href="&lt;http://www.research.att.com/sw/tools/graphviz/&gt;`_">graphviz</a> documentation.</p>
+<p>Example:</p>
+<div class="highlight-python"><div class="highlight"><pre># customizing the way the overall graph is drawn
+dot.style(size=&#39;10,10&#39;, rankdir=&#39;RL&#39;, page=&#39;5, 5&#39; , ranksep=0.75)
+
+# customizing node drawing
+dot.node_style(1, label=&#39;BASE_NODE&#39;,shape=&#39;box&#39;, color=&#39;blue&#39; )
+dot.node_style(2, style=&#39;filled&#39;, fillcolor=&#39;red&#39;)
+
+# customizing edge drawing
+dot.edge_style(1, 2, style=&#39;dotted&#39;)
+dot.edge_style(3, 5, arrowhead=&#39;dot&#39;, label=&#39;binds&#39;, labelangle=&#39;90&#39;)
+dot.edge_style(4, 5, arrowsize=2, style=&#39;bold&#39;)
+
+
+.. note::
+
+ dotty (invoked via :py:func:`~altgraph.Dot.display`) may not be able to
+ display all graphics styles. To verify the output save it to an image
+ file and look at it that way.
+</pre></div>
+</div>
+</div>
+<div class="section" id="valid-attributes">
+<h2>Valid attributes<a class="headerlink" href="#valid-attributes" title="Permalink to this headline">¶</a></h2>
+<ul>
+<li><p class="first">dot styles, passed via the <a class="reference internal" href="#altgraph.Dot.Dot.style" title="altgraph.Dot.Dot.style"><tt class="xref py py-meth docutils literal"><span class="pre">Dot.style()</span></tt></a> method:</p>
+<div class="highlight-python"><div class="highlight"><pre>rankdir = &#39;LR&#39; (draws the graph horizontally, left to right)
+ranksep = number (rank separation in inches)
+</pre></div>
+</div>
+</li>
+<li><p class="first">node attributes, passed via the <a class="reference internal" href="#altgraph.Dot.Dot.node_style" title="altgraph.Dot.Dot.node_style"><tt class="xref py py-meth docutils literal"><span class="pre">Dot.node_style()</span></tt></a> method:</p>
+<div class="highlight-python"><div class="highlight"><pre><span class="n">style</span> <span class="o">=</span> <span class="s">&#39;filled&#39;</span> <span class="o">|</span> <span class="s">&#39;invisible&#39;</span> <span class="o">|</span> <span class="s">&#39;diagonals&#39;</span> <span class="o">|</span> <span class="s">&#39;rounded&#39;</span>
+<span class="n">shape</span> <span class="o">=</span> <span class="s">&#39;box&#39;</span> <span class="o">|</span> <span class="s">&#39;ellipse&#39;</span> <span class="o">|</span> <span class="s">&#39;circle&#39;</span> <span class="o">|</span> <span class="s">&#39;point&#39;</span> <span class="o">|</span> <span class="s">&#39;triangle&#39;</span>
+</pre></div>
+</div>
+</li>
+<li><p class="first">edge attributes, passed via the <tt class="xref py py-meth docutils literal"><span class="pre">Dot.edge_style()</span></tt> method:</p>
+<div class="highlight-python"><div class="highlight"><pre>style = &#39;dashed&#39; | &#39;dotted&#39; | &#39;solid&#39; | &#39;invis&#39; | &#39;bold&#39;
+arrowhead = &#39;box&#39; | &#39;crow&#39; | &#39;diamond&#39; | &#39;dot&#39; | &#39;inv&#39; | &#39;none&#39; | &#39;tee&#39; | &#39;vee&#39;
+weight = number (the larger the number the closer the nodes will be)
+</pre></div>
+</div>
+</li>
+<li><p class="first">valid <a class="reference external" href="http://www.research.att.com/~erg/graphviz/info/colors.html">graphviz colors</a></p>
+</li>
+<li><p class="first">for more details on how to control the graph drawing process see the
+<a class="reference external" href="http://www.research.att.com/sw/tools/graphviz/refs.html">graphviz reference</a>.</p>
+</li>
+</ul>
+</div>
+<div class="section" id="class-interface">
+<h2>Class interface<a class="headerlink" href="#class-interface" title="Permalink to this headline">¶</a></h2>
+<dl class="class">
+<dt id="altgraph.Dot.Dot">
+<em class="property">class </em><tt class="descclassname">altgraph.Dot.</tt><tt class="descname">Dot</tt><big>(</big><em>graph</em><span class="optional">[</span>, <em>nodes</em><span class="optional">[</span>, <em>edgefn</em><span class="optional">[</span>, <em>nodevisitor</em><span class="optional">[</span>, <em>edgevisitor</em><span class="optional">[</span>, <em>name</em><span class="optional">[</span>, <em>dot</em><span class="optional">[</span>, <em>dotty</em><span class="optional">[</span>, <em>neato</em><span class="optional">[</span>, <em>graphtype</em><span class="optional">]</span><span class="optional">]</span><span class="optional">]</span><span class="optional">]</span><span class="optional">]</span><span class="optional">]</span><span class="optional">]</span><span class="optional">]</span><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.Dot.Dot" title="Permalink to this definition">¶</a></dt>
+<dd><p>Creates a new Dot generator based on the specified
+<a class="reference internal" href="graph.html#altgraph.Graph.Graph" title="altgraph.Graph.Graph"><tt class="xref py py-class docutils literal"><span class="pre">Graph</span></tt></a>. The Dot generator won&#8217;t reference
+the <em>graph</em> once it is constructed.</p>
+<p>If the <em>nodes</em> argument is present it is the list of nodes to include
+in the graph, otherwise all nodes in <em>graph</em> are included.</p>
+<p>If the <em>edgefn</em> argument is present it is a function that yields the
+nodes connected to another node, this defaults to
+<tt class="xref py py-meth docutils literal"><span class="pre">graph.out_nbr</span></tt>. The constructor won&#8217;t
+add edges to the dot file unless both the head and tail of the edge
+are in <em>nodes</em>.</p>
+<p>If the <em>name</em> is present it specifies the name of the graph in the resulting
+dot file. The default is <tt class="docutils literal"><span class="pre">&quot;G&quot;</span></tt>.</p>
+<p>The functions <em>nodevisitor</em> and <em>edgevisitor</em> return the default style
+for a given edge or node (both default to functions that return an empty
+style).</p>
+<p>The arguments <em>dot</em>, <em>dotty</em> and <em>neato</em> are used to pass the path to
+the corresponding <a class="reference external" href="&lt;http://www.research.att.com/sw/tools/graphviz/&gt;`_">graphviz</a> command.</p>
+</dd></dl>
+
+<div class="section" id="updating-graph-attributes">
+<h3>Updating graph attributes<a class="headerlink" href="#updating-graph-attributes" title="Permalink to this headline">¶</a></h3>
+<dl class="method">
+<dt id="altgraph.Dot.Dot.style">
+<tt class="descclassname">Dot.</tt><tt class="descname">style</tt><big>(</big><em>**attr</em><big>)</big><a class="headerlink" href="#altgraph.Dot.Dot.style" title="Permalink to this definition">¶</a></dt>
+<dd><p>Sets the overall style (graph attributes) to the given attributes.</p>
+<p>See <a class="reference internal" href="#valid-attributes">Valid Attributes</a> for more information about the attributes.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Dot.Dot.node_style">
+<tt class="descclassname">Dot.</tt><tt class="descname">node_style</tt><big>(</big><em>node</em>, <em>**attr</em><big>)</big><a class="headerlink" href="#altgraph.Dot.Dot.node_style" title="Permalink to this definition">¶</a></dt>
+<dd><p>Sets the style for <em>node</em> to the given attributes.</p>
+<p>This method will add <em>node</em> to the graph when it isn&#8217;t already
+present.</p>
+<p>See <a class="reference internal" href="#valid-attributes">Valid Attributes</a> for more information about the attributes.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Dot.Dot.all_node_style">
+<tt class="descclassname">Dot.</tt><tt class="descname">all_node_style</tt><big>(</big><em>**attr</em><big>)</big><a class="headerlink" href="#altgraph.Dot.Dot.all_node_style" title="Permalink to this definition">¶</a></dt>
+<dd><p>Replaces the current style for all nodes</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Dot.edge_style">
+<tt class="descclassname">altgraph.Dot.</tt><tt class="descname">edge_style</tt><big>(</big><em>head</em>, <em>tail</em>, <em>**attr</em><big>)</big><a class="headerlink" href="#altgraph.Dot.edge_style" title="Permalink to this definition">¶</a></dt>
+<dd><p>Sets the style of an edge to the given attributes. The edge will
+be added to the graph when it isn&#8217;t already present, but <em>head</em>
+and <em>tail</em> must both be valid nodes.</p>
+<p>See <a class="reference internal" href="#valid-attributes">Valid Attributes</a> for more information about the attributes.</p>
+</dd></dl>
+
+</div>
+<div class="section" id="emitting-output">
+<h3>Emitting output<a class="headerlink" href="#emitting-output" title="Permalink to this headline">¶</a></h3>
+<dl class="method">
+<dt id="altgraph.Dot.Dot.display">
+<tt class="descclassname">Dot.</tt><tt class="descname">display</tt><big>(</big><span class="optional">[</span><em>mode</em><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.Dot.Dot.display" title="Permalink to this definition">¶</a></dt>
+<dd><p>Displays the current graph via dotty.</p>
+<p>If the <em>mode</em> is <tt class="docutils literal"><span class="pre">&quot;neato&quot;</span></tt> the dot file is processed with
+the neato command before displaying.</p>
+<p>This method won&#8217;t return until the dotty command exits.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Dot.save_dot">
+<tt class="descclassname">altgraph.Dot.</tt><tt class="descname">save_dot</tt><big>(</big><em>filename</em><big>)</big><a class="headerlink" href="#altgraph.Dot.save_dot" title="Permalink to this definition">¶</a></dt>
+<dd><p>Saves the current graph representation into the given file.</p>
+<div class="admonition note">
+<p class="first admonition-title">Note</p>
+<p>For backward compatibility reasons this method can also
+be called without an argument, it will then write the graph
+into a fixed filename (present in the attribute <tt class="xref py py-data docutils literal"><span class="pre">Graph.temp_dot</span></tt>).</p>
+<p class="last">This feature is deprecated and should not be used.</p>
+</div>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Dot.save_image">
+<tt class="descclassname">altgraph.Dot.</tt><tt class="descname">save_image</tt><big>(</big><em>file_name</em><span class="optional">[</span>, <em>file_type</em><span class="optional">[</span>, <em>mode</em><span class="optional">]</span><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.Dot.save_image" title="Permalink to this definition">¶</a></dt>
+<dd><p>Saves the current graph representation as an image file. The output
+is written into a file whose basename is <em>file_name</em> and whose suffix
+is <em>file_type</em>.</p>
+<p>The <em>file_type</em> specifies the type of file to write, the default
+is <tt class="docutils literal"><span class="pre">&quot;gif&quot;</span></tt>.</p>
+<p>If the <em>mode</em> is <tt class="docutils literal"><span class="pre">&quot;neato&quot;</span></tt> the dot file is processed with
+the neato command before displaying.</p>
+<div class="admonition note">
+<p class="first admonition-title">Note</p>
+<p>For backward compatibility reasons this method can also
+be called without an argument, it will then write the graph
+with a fixed basename (<tt class="docutils literal"><span class="pre">&quot;out&quot;</span></tt>).</p>
+<p class="last">This feature is deprecated and should not be used.</p>
+</div>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Dot.iterdot">
+<tt class="descclassname">altgraph.Dot.</tt><tt class="descname">iterdot</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.Dot.iterdot" title="Permalink to this definition">¶</a></dt>
+<dd><p>Yields all lines of a <a class="reference external" href="&lt;http://www.research.att.com/sw/tools/graphviz/&gt;`_">graphviz</a> input file (including line endings).</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Dot.__iter__">
+<tt class="descclassname">altgraph.Dot.</tt><tt class="descname">__iter__</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.Dot.__iter__" title="Permalink to this definition">¶</a></dt>
+<dd><p>Alias for the <a class="reference internal" href="#altgraph.Dot.iterdot" title="altgraph.Dot.iterdot"><tt class="xref py py-meth docutils literal"><span class="pre">iterdot()</span></tt></a> method.</p>
+</dd></dl>
+
+</div>
+</div>
+</div>
+
+
+ </div>
+ </div>
+ </div>
+ <div class="sphinxsidebar">
+ <div class="sphinxsidebarwrapper">
+ <h3><a href="index.html">Table Of Contents</a></h3>
+ <ul>
+<li><a class="reference internal" href="#"><tt class="docutils literal"><span class="pre">altgraph.Dot</span></tt> &#8212; Interface to the dot language</a><ul>
+<li><a class="reference internal" href="#example-usage">Example usage</a></li>
+<li><a class="reference internal" href="#directed-graph-and-non-directed-graph">Directed graph and non-directed graph</a></li>
+<li><a class="reference internal" href="#customizing-the-output">Customizing the output</a></li>
+<li><a class="reference internal" href="#valid-attributes">Valid attributes</a></li>
+<li><a class="reference internal" href="#class-interface">Class interface</a><ul>
+<li><a class="reference internal" href="#updating-graph-attributes">Updating graph attributes</a></li>
+<li><a class="reference internal" href="#emitting-output">Emitting output</a></li>
+</ul>
+</li>
+</ul>
+</li>
+</ul>
+
+ <h4>Previous topic</h4>
+ <p class="topless"><a href="graphutil.html"
+ title="previous chapter"><tt class="docutils literal"><span class="pre">altgraph.GraphUtil</span></tt> &#8212; Utility functions</a></p>
+<div id="searchbox" style="display: none">
+ <h3>Quick search</h3>
+ <form class="search" action="search.html" method="get">
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+
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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+
+<div class="genindex-jumpbox">
+ <a href="#_"><strong>_</strong></a>
+ | <a href="#A"><strong>A</strong></a>
+ | <a href="#B"><strong>B</strong></a>
+ | <a href="#C"><strong>C</strong></a>
+ | <a href="#D"><strong>D</strong></a>
+ | <a href="#E"><strong>E</strong></a>
+ | <a href="#F"><strong>F</strong></a>
+ | <a href="#G"><strong>G</strong></a>
+ | <a href="#H"><strong>H</strong></a>
+ | <a href="#I"><strong>I</strong></a>
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+ | <a href="#R"><strong>R</strong></a>
+ | <a href="#S"><strong>S</strong></a>
+ | <a href="#T"><strong>T</strong></a>
+
+</div>
+<h2 id="_">_</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.__contains__">__contains__() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ <dd><dl>
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph.__contains__">(altgraph.ObjectGraph.ObjectGraph method)</a>
+ </dt>
+
+ </dl></dd>
+ </dl></td>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.__iter__">__iter__() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ <dd><dl>
+
+ <dt><a href="dot.html#altgraph.Dot.__iter__">(in module altgraph.Dot)</a>
+ </dt>
+
+ </dl></dd>
+ </dl></td>
+</tr></table>
+
+<h2 id="A">A</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.add_edge">add_edge() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.add_node">add_node() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph.addNode">addNode() (altgraph.ObjectGraph.ObjectGraph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.all_degree">all_degree() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.all_edges">all_edges() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.all_nbrs">all_nbrs() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="dot.html#altgraph.Dot.Dot.all_node_style">all_node_style() (altgraph.Dot.Dot method)</a>
+ </dt>
+
+ </dl></td>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="core.html#module-altgraph">altgraph (module)</a>
+ </dt>
+
+
+ <dt><a href="dot.html#module-altgraph.Dot">altgraph.Dot (module)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#module-altgraph.Graph">altgraph.Graph (module)</a>
+ </dt>
+
+
+ <dt><a href="graphalgo.html#module-altgraph.GraphAlgo">altgraph.GraphAlgo (module)</a>
+ </dt>
+
+
+ <dt><a href="graphstat.html#module-altgraph.GraphStat">altgraph.GraphStat (module)</a>
+ </dt>
+
+
+ <dt><a href="graphutil.html#module-altgraph.GraphUtil">altgraph.GraphUtil (module)</a>
+ </dt>
+
+
+ <dt><a href="objectgraph.html#module-altgraph.ObjectGraph">altgraph.ObjectGraph (module)</a>
+ </dt>
+
+ </dl></td>
+</tr></table>
+
+<h2 id="B">B</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.back_bfs">back_bfs() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.back_bfs_subgraph">back_bfs_subgraph() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ </dl></td>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.back_topo_sort">back_topo_sort() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ </dl></td>
+</tr></table>
+
+<h2 id="C">C</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.clust_coef">clust_coef() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.connected">connected() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ </dl></td>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph.createNode">createNode() (altgraph.ObjectGraph.ObjectGraph method)</a>
+ </dt>
+
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph.createReferences">createReferences() (altgraph.ObjectGraph.ObjectGraph method)</a>
+ </dt>
+
+ </dl></td>
+</tr></table>
+
+<h2 id="D">D</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graphstat.html#altgraph.GraphStat.degree_dist">degree_dist() (in module altgraph.GraphStat)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.describe_edge">describe_edge() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.describe_node">describe_node() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ </dl></td>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graphalgo.html#altgraph.GraphAlgo.dijkstra">dijkstra() (in module altgraph.GraphAlgo)</a>
+ </dt>
+
+
+ <dt><a href="dot.html#altgraph.Dot.Dot.display">display() (altgraph.Dot.Dot method)</a>
+ </dt>
+
+
+ <dt><a href="dot.html#altgraph.Dot.Dot">Dot (class in altgraph.Dot)</a>
+ </dt>
+
+ </dl></td>
+</tr></table>
+
+<h2 id="E">E</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.edge_by_id">edge_by_id() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.edge_by_node">edge_by_node() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.edge_data">edge_data() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ </dl></td>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.edge_list">edge_list() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="dot.html#altgraph.Dot.edge_style">edge_style() (in module altgraph.Dot)</a>
+ </dt>
+
+ </dl></td>
+</tr></table>
+
+<h2 id="F">F</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graphutil.html#altgraph.GraphUtil.filter_stack">filter_stack() (in module altgraph.GraphUtil)</a>
+ </dt>
+
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph.filterStack">filterStack() (altgraph.ObjectGraph.ObjectGraph method)</a>
+ </dt>
+
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph.findNode">findNode() (altgraph.ObjectGraph.ObjectGraph method)</a>
+ </dt>
+
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph.flatten">flatten() (altgraph.ObjectGraph.ObjectGraph method)</a>
+ </dt>
+
+ </dl></td>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.forw_bfs">forw_bfs() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.forw_bfs_subgraph">forw_bfs_subgraph() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.forw_topo_sort">forw_topo_sort() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ </dl></td>
+</tr></table>
+
+<h2 id="G">G</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graphutil.html#altgraph.GraphUtil.generate_random_graph">generate_random_graph() (in module altgraph.GraphUtil)</a>
+ </dt>
+
+
+ <dt><a href="graphutil.html#altgraph.GraphUtil.generate_scale_free_graph">generate_scale_free_graph() (in module altgraph.GraphUtil)</a>
+ </dt>
+
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph.get_edges">get_edges() (altgraph.ObjectGraph.ObjectGraph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.get_hops">get_hops() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ </dl></td>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.getIdent">getIdent() (in module altgraph.ObjectGraph)</a>
+ </dt>
+
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph.getRawIdent">getRawIdent() (altgraph.ObjectGraph.ObjectGraph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph">Graph (class in altgraph.Graph)</a>
+ </dt>
+
+
+ <dt><a href="core.html#altgraph.GraphError">GraphError</a>
+ </dt>
+
+ </dl></td>
+</tr></table>
+
+<h2 id="H">H</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.head">head() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.hidden_edge_list">hidden_edge_list() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.hidden_node_list">hidden_node_list() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ </dl></td>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.hide_edge">hide_edge() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.hide_node">hide_node() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ </dl></td>
+</tr></table>
+
+<h2 id="I">I</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.inc_degree">inc_degree() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.inc_edges">inc_edges() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.inc_nbrs">inc_nbrs() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ </dl></td>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.iterdata">iterdata() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.iterdfs">iterdfs() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="dot.html#altgraph.Dot.iterdot">iterdot() (in module altgraph.Dot)</a>
+ </dt>
+
+ </dl></td>
+</tr></table>
+
+<h2 id="M">M</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph.msg">msg() (altgraph.ObjectGraph.ObjectGraph method)</a>
+ </dt>
+
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph.msgin">msgin() (altgraph.ObjectGraph.ObjectGraph method)</a>
+ </dt>
+
+ </dl></td>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph.msgout">msgout() (altgraph.ObjectGraph.ObjectGraph method)</a>
+ </dt>
+
+ </dl></td>
+</tr></table>
+
+<h2 id="N">N</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.node_data">node_data() (in module altgraph.Graph)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.node_list">node_list() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="dot.html#altgraph.Dot.Dot.node_style">node_style() (altgraph.Dot.Dot method)</a>
+ </dt>
+
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph.nodes">nodes() (altgraph.ObjectGraph.ObjectGraph method)</a>
+ </dt>
+
+ </dl></td>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.number_of_edges">number_of_edges() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.number_of_hidden_edges">number_of_hidden_edges() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.number_of_hidden_nodes">number_of_hidden_nodes() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.number_of_nodes">number_of_nodes() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ </dl></td>
+</tr></table>
+
+<h2 id="O">O</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph">ObjectGraph (class in altgraph.ObjectGraph)</a>
+ </dt>
+
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph.debug">ObjectGraph.debug (in module altgraph.ObjectGraph)</a>
+ </dt>
+
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph.graph">ObjectGraph.graph (in module altgraph.ObjectGraph)</a>
+ </dt>
+
+ </dl></td>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.out_degree">out_degree() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.out_edges">out_edges() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.out_nbrs">out_nbrs() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ </dl></td>
+</tr></table>
+
+<h2 id="R">R</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.ObjectGraph.removeNode">removeNode() (altgraph.ObjectGraph.ObjectGraph method)</a>
+ </dt>
+
+
+ <dt><a href="objectgraph.html#altgraph.ObjectGraph.removeReference">removeReference() (in module altgraph.ObjectGraph)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.restore_all_edges">restore_all_edges() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ </dl></td>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.restore_all_nodes">restore_all_nodes() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.restore_edge">restore_edge() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.restore_node">restore_node() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ </dl></td>
+</tr></table>
+
+<h2 id="S">S</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="dot.html#altgraph.Dot.save_dot">save_dot() (in module altgraph.Dot)</a>
+ </dt>
+
+
+ <dt><a href="dot.html#altgraph.Dot.save_image">save_image() (in module altgraph.Dot)</a>
+ </dt>
+
+ </dl></td>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graphalgo.html#altgraph.GraphAlgo.shortest_path">shortest_path() (in module altgraph.GraphAlgo)</a>
+ </dt>
+
+
+ <dt><a href="dot.html#altgraph.Dot.Dot.style">style() (altgraph.Dot.Dot method)</a>
+ </dt>
+
+ </dl></td>
+</tr></table>
+
+<h2 id="T">T</h2>
+<table style="width: 100%" class="indextable genindextable"><tr>
+ <td style="width: 33%" valign="top"><dl>
+
+ <dt><a href="graph.html#altgraph.Graph.Graph.tail">tail() (altgraph.Graph.Graph method)</a>
+ </dt>
+
+ </dl></td>
+</tr></table>
+
+
+
+ </div>
+ </div>
+ </div>
+ <div class="sphinxsidebar">
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+
+ <div class="section" id="module-altgraph.Graph">
+<span id="altgraph-graph-basic-directional-graphs"></span><h1><a class="reference internal" href="#module-altgraph.Graph" title="altgraph.Graph: Basic directional graphs."><tt class="xref py py-mod docutils literal"><span class="pre">altgraph.Graph</span></tt></a> &#8212; Basic directional graphs<a class="headerlink" href="#module-altgraph.Graph" title="Permalink to this headline">¶</a></h1>
+<p>The module <a class="reference internal" href="#module-altgraph.Graph" title="altgraph.Graph: Basic directional graphs."><tt class="xref py py-mod docutils literal"><span class="pre">altgraph.Graph</span></tt></a> provides a class <a class="reference internal" href="#altgraph.Graph.Graph" title="altgraph.Graph.Graph"><tt class="xref py py-class docutils literal"><span class="pre">Graph</span></tt></a> that
+represents a directed graph with <em>N</em> nodes and <em>E</em> edges.</p>
+<dl class="class">
+<dt id="altgraph.Graph.Graph">
+<em class="property">class </em><tt class="descclassname">altgraph.Graph.</tt><tt class="descname">Graph</tt><big>(</big><span class="optional">[</span><em>edges</em><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph" title="Permalink to this definition">¶</a></dt>
+<dd><p>Constructs a new empty <a class="reference internal" href="#altgraph.Graph.Graph" title="altgraph.Graph.Graph"><tt class="xref py py-class docutils literal"><span class="pre">Graph</span></tt></a> object. If the optional
+<em>edges</em> parameter is supplied, updates the graph by adding the
+specified edges.</p>
+<p>All of the elements in <em>edges</em> should be tuples with two or three
+elements. The first two elements of the tuple are the source and
+destination node of the edge, the optional third element is the
+edge data. The source and destination nodes are added to the graph
+when the aren&#8217;t already present.</p>
+</dd></dl>
+
+<div class="section" id="node-related-methods">
+<h2>Node related methods<a class="headerlink" href="#node-related-methods" title="Permalink to this headline">¶</a></h2>
+<dl class="method">
+<dt id="altgraph.Graph.Graph.add_node">
+<tt class="descclassname">Graph.</tt><tt class="descname">add_node</tt><big>(</big><em>node</em><span class="optional">[</span>, <em>node_data</em><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.add_node" title="Permalink to this definition">¶</a></dt>
+<dd><p>Adds a new node to the graph if it is not already present. The new
+node must be a hashable object.</p>
+<p>Arbitrary data can be attached to the node via the optional <em>node_data</em>
+argument.</p>
+<div class="admonition note">
+<p class="first admonition-title">Note</p>
+<p class="last">the node also won&#8217;t be added to the graph when it is
+present but currently hidden.</p>
+</div>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.hide_node">
+<tt class="descclassname">Graph.</tt><tt class="descname">hide_node</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.hide_node" title="Permalink to this definition">¶</a></dt>
+<dd><p>Hides a <em>node</em> from the graph. The incoming and outgoing edges of
+the node will also be hidden.</p>
+<p>Raises <a class="reference internal" href="core.html#altgraph.GraphError" title="altgraph.GraphError"><tt class="xref py py-class docutils literal"><span class="pre">altgraph.GraphError</span></tt></a> when the node is not (visible)
+node of the graph.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.restore_node">
+<tt class="descclassname">Graph.</tt><tt class="descname">restore_node</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.restore_node" title="Permalink to this definition">¶</a></dt>
+<dd><p>Restores a previously hidden <em>node</em>. The incoming and outgoing
+edges of the node are also restored.</p>
+<p>Raises <a class="reference internal" href="core.html#altgraph.GraphError" title="altgraph.GraphError"><tt class="xref py py-class docutils literal"><span class="pre">altgraph.GraphError</span></tt></a> when the node is not a hidden
+node of the graph.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.restore_all_nodes">
+<tt class="descclassname">Graph.</tt><tt class="descname">restore_all_nodes</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.restore_all_nodes" title="Permalink to this definition">¶</a></dt>
+<dd><p>Restores all hidden nodes.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.number_of_nodes">
+<tt class="descclassname">Graph.</tt><tt class="descname">number_of_nodes</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.number_of_nodes" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the number of visible nodes in the graph.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.number_of_hidden_nodes">
+<tt class="descclassname">Graph.</tt><tt class="descname">number_of_hidden_nodes</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.number_of_hidden_nodes" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the number of hidden nodes in the graph.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.node_list">
+<tt class="descclassname">Graph.</tt><tt class="descname">node_list</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.node_list" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return a list with all visible nodes in the graph.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.hidden_node_list">
+<tt class="descclassname">Graph.</tt><tt class="descname">hidden_node_list</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.hidden_node_list" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return a list with all hidden nodes in the graph.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.node_data">
+<tt class="descclassname">altgraph.Graph.</tt><tt class="descname">node_data</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.Graph.node_data" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the data associated with the <em>node</em> when it was
+added.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.describe_node">
+<tt class="descclassname">Graph.</tt><tt class="descname">describe_node</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.describe_node" title="Permalink to this definition">¶</a></dt>
+<dd><p>Returns <em>node</em>, the node&#8217;s data and the lists of outgoing
+and incoming edges for the node.</p>
+<div class="admonition note">
+<p class="first admonition-title">Note</p>
+<p class="last">the edge lists should not be modified, doing so
+can result in unpredicatable behavior.</p>
+</div>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.__contains__">
+<tt class="descclassname">Graph.</tt><tt class="descname">__contains__</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.__contains__" title="Permalink to this definition">¶</a></dt>
+<dd><p>Returns True iff <em>node</em> is a node in the graph. This
+method is accessed through the <em>in</em> operator.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.__iter__">
+<tt class="descclassname">Graph.</tt><tt class="descname">__iter__</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.__iter__" title="Permalink to this definition">¶</a></dt>
+<dd><p>Yield all nodes in the graph.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.out_edges">
+<tt class="descclassname">Graph.</tt><tt class="descname">out_edges</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.out_edges" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the list of outgoing edges for <em>node</em></p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.inc_edges">
+<tt class="descclassname">Graph.</tt><tt class="descname">inc_edges</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.inc_edges" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the list of incoming edges for <em>node</em></p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.all_edges">
+<tt class="descclassname">Graph.</tt><tt class="descname">all_edges</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.all_edges" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the list of incoming and outgoing edges for <em>node</em></p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.out_degree">
+<tt class="descclassname">Graph.</tt><tt class="descname">out_degree</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.out_degree" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the number of outgoing edges for <em>node</em>.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.inc_degree">
+<tt class="descclassname">Graph.</tt><tt class="descname">inc_degree</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.inc_degree" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the number of incoming edges for <em>node</em>.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.all_degree">
+<tt class="descclassname">Graph.</tt><tt class="descname">all_degree</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.all_degree" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the number of edges (incoming or outgoing) for <em>node</em>.</p>
+</dd></dl>
+
+</div>
+<div class="section" id="edge-related-methods">
+<h2>Edge related methods<a class="headerlink" href="#edge-related-methods" title="Permalink to this headline">¶</a></h2>
+<dl class="method">
+<dt id="altgraph.Graph.Graph.add_edge">
+<tt class="descclassname">Graph.</tt><tt class="descname">add_edge</tt><big>(</big><em>head_id</em>, <em>tail_id</em><span class="optional">[</span>, <em>edge data</em><span class="optional">[</span>, <em>create_nodes</em><span class="optional">]</span><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.add_edge" title="Permalink to this definition">¶</a></dt>
+<dd><p>Adds a directed edge from <em>head_id</em> to <em>tail_id</em>. Arbitrary data can
+be added via <em>edge_data</em>. When <em>create_nodes</em> is <em>True</em> (the default),
+<em>head_id</em> and <em>tail_id</em> will be added to the graph when the aren&#8217;t
+already present.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.hide_edge">
+<tt class="descclassname">Graph.</tt><tt class="descname">hide_edge</tt><big>(</big><em>edge</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.hide_edge" title="Permalink to this definition">¶</a></dt>
+<dd><p>Hides an edge from the graph. The edge may be unhidden at some later
+time.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.restore_edge">
+<tt class="descclassname">Graph.</tt><tt class="descname">restore_edge</tt><big>(</big><em>edge</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.restore_edge" title="Permalink to this definition">¶</a></dt>
+<dd><p>Restores a previously hidden <em>edge</em>.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.restore_all_edges">
+<tt class="descclassname">Graph.</tt><tt class="descname">restore_all_edges</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.restore_all_edges" title="Permalink to this definition">¶</a></dt>
+<dd><p>Restore all edges that were hidden before, except for edges
+referring to hidden nodes.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.edge_by_node">
+<tt class="descclassname">Graph.</tt><tt class="descname">edge_by_node</tt><big>(</big><em>head</em>, <em>tail</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.edge_by_node" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the edge ID for an edge from <em>head</em> to <em>tail</em>,
+or <a class="reference external" href="http://docs.python.org/library/constants.html#None" title="(in Python v2.7)"><tt class="xref py py-data docutils literal"><span class="pre">None</span></tt></a> when no such edge exists.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.edge_by_id">
+<tt class="descclassname">Graph.</tt><tt class="descname">edge_by_id</tt><big>(</big><em>edge</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.edge_by_id" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the head and tail of the <em>edge</em></p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.edge_data">
+<tt class="descclassname">Graph.</tt><tt class="descname">edge_data</tt><big>(</big><em>edge</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.edge_data" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the data associated with the <em>edge</em>.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.head">
+<tt class="descclassname">Graph.</tt><tt class="descname">head</tt><big>(</big><em>edge</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.head" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the head of an <em>edge</em></p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.tail">
+<tt class="descclassname">Graph.</tt><tt class="descname">tail</tt><big>(</big><em>edge</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.tail" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the tail of an <em>edge</em></p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.describe_edge">
+<tt class="descclassname">Graph.</tt><tt class="descname">describe_edge</tt><big>(</big><em>edge</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.describe_edge" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the <em>edge</em>, the associated data, its head and tail.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.number_of_edges">
+<tt class="descclassname">Graph.</tt><tt class="descname">number_of_edges</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.number_of_edges" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the number of visible edges.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.number_of_hidden_edges">
+<tt class="descclassname">Graph.</tt><tt class="descname">number_of_hidden_edges</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.number_of_hidden_edges" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return the number of hidden edges.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.edge_list">
+<tt class="descclassname">Graph.</tt><tt class="descname">edge_list</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.edge_list" title="Permalink to this definition">¶</a></dt>
+<dd><p>Returns a list with all visible edges in the graph.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.hidden_edge_list">
+<tt class="descclassname">Graph.</tt><tt class="descname">hidden_edge_list</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.hidden_edge_list" title="Permalink to this definition">¶</a></dt>
+<dd><p>Returns a list with all hidden edges in the graph.</p>
+</dd></dl>
+
+</div>
+<div class="section" id="graph-traversal">
+<h2>Graph traversal<a class="headerlink" href="#graph-traversal" title="Permalink to this headline">¶</a></h2>
+<dl class="method">
+<dt id="altgraph.Graph.Graph.out_nbrs">
+<tt class="descclassname">Graph.</tt><tt class="descname">out_nbrs</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.out_nbrs" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return a list of all nodes connected by outgoing edges.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.inc_nbrs">
+<tt class="descclassname">Graph.</tt><tt class="descname">inc_nbrs</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.inc_nbrs" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return a list of all nodes connected by incoming edges.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.all_nbrs">
+<tt class="descclassname">Graph.</tt><tt class="descname">all_nbrs</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.all_nbrs" title="Permalink to this definition">¶</a></dt>
+<dd><p>Returns a list of nodes connected by an incoming or outgoing edge.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.forw_topo_sort">
+<tt class="descclassname">Graph.</tt><tt class="descname">forw_topo_sort</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.forw_topo_sort" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return a list of nodes where the successors (based on outgoing
+edges) of any given node apear in the sequence after that node.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.back_topo_sort">
+<tt class="descclassname">Graph.</tt><tt class="descname">back_topo_sort</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.back_topo_sort" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return a list of nodes where the successors (based on incoming
+edges) of any given node apear in the sequence after that node.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.forw_bfs_subgraph">
+<tt class="descclassname">Graph.</tt><tt class="descname">forw_bfs_subgraph</tt><big>(</big><em>start_id</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.forw_bfs_subgraph" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return a subgraph consisting of the breadth first
+reachable nodes from <em>start_id</em> based on their outgoing edges.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.back_bfs_subgraph">
+<tt class="descclassname">Graph.</tt><tt class="descname">back_bfs_subgraph</tt><big>(</big><em>start_id</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.back_bfs_subgraph" title="Permalink to this definition">¶</a></dt>
+<dd><p>Return a subgraph consisting of the breadth first
+reachable nodes from <em>start_id</em> based on their incoming edges.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.iterdfs">
+<tt class="descclassname">Graph.</tt><tt class="descname">iterdfs</tt><big>(</big><em>start</em><span class="optional">[</span>, <em>end</em><span class="optional">[</span>, <em>forward</em><span class="optional">]</span><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.iterdfs" title="Permalink to this definition">¶</a></dt>
+<dd><p>Yield nodes in a depth first traversal starting at the <em>start</em>
+node.</p>
+<p>If <em>end</em> is specified traversal stops when reaching that node.</p>
+<p>If forward is True (the default) edges are traversed in forward
+direction, otherwise they are traversed in reverse direction.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.iterdata">
+<tt class="descclassname">Graph.</tt><tt class="descname">iterdata</tt><big>(</big><em>start</em><span class="optional">[</span>, <em>end</em><span class="optional">[</span>, <em>forward</em><span class="optional">[</span>, <em>condition</em><span class="optional">]</span><span class="optional">]</span><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.iterdata" title="Permalink to this definition">¶</a></dt>
+<dd><p>Yield the associated data for nodes in a depth first traversal
+starting at the <em>start</em> node. This method will not yield values for nodes
+without associated data.</p>
+<p>If <em>end</em> is specified traversal stops when reaching that node.</p>
+<p>If <em>condition</em> is specified and the condition callable returns
+False for the associated data this method will not yield the
+associated data and will not follow the edges for the node.</p>
+<p>If forward is True (the default) edges are traversed in forward
+direction, otherwise they are traversed in reverse direction.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.forw_bfs">
+<tt class="descclassname">Graph.</tt><tt class="descname">forw_bfs</tt><big>(</big><em>start</em><span class="optional">[</span>, <em>end</em><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.forw_bfs" title="Permalink to this definition">¶</a></dt>
+<dd><p>Returns a list of nodes starting at <em>start</em> in some bread first
+search order (following outgoing edges).</p>
+<p>When <em>end</em> is specified iteration stops at that node.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.back_bfs">
+<tt class="descclassname">Graph.</tt><tt class="descname">back_bfs</tt><big>(</big><em>start</em><span class="optional">[</span>, <em>end</em><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.back_bfs" title="Permalink to this definition">¶</a></dt>
+<dd><p>Returns a list of nodes starting at <em>start</em> in some bread first
+search order (following incoming edges).</p>
+<p>When <em>end</em> is specified iteration stops at that node.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.get_hops">
+<tt class="descclassname">Graph.</tt><tt class="descname">get_hops</tt><big>(</big><em>start</em><span class="optional">[</span>, <em>end</em><span class="optional">[</span>, <em>forward</em><span class="optional">]</span><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.get_hops" title="Permalink to this definition">¶</a></dt>
+<dd><p>Computes the hop distance to all nodes centered around a specified node.</p>
+<p>First order neighbours are at hop 1, their neigbours are at hop 2 etc.
+Uses <a class="reference internal" href="#altgraph.Graph.Graph.forw_bfs" title="altgraph.Graph.Graph.forw_bfs"><tt class="xref py py-meth docutils literal"><span class="pre">forw_bfs()</span></tt></a> or <a class="reference internal" href="#altgraph.Graph.Graph.back_bfs" title="altgraph.Graph.Graph.back_bfs"><tt class="xref py py-meth docutils literal"><span class="pre">back_bfs()</span></tt></a> depending on the value of
+the forward parameter.</p>
+<p>If the distance between all neighbouring nodes is 1 the hop number
+corresponds to the shortest distance between the nodes.</p>
+<p>Typical usage:</p>
+<div class="highlight-python"><div class="highlight"><pre><span class="gp">&gt;&gt;&gt; </span><span class="k">print</span> <span class="n">graph</span><span class="o">.</span><span class="n">get_hops</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="mi">8</span><span class="p">)</span>
+<span class="gp">&gt;&gt;&gt; </span><span class="p">[(</span><span class="mi">1</span><span class="p">,</span> <span class="mi">0</span><span class="p">),</span> <span class="p">(</span><span class="mi">2</span><span class="p">,</span> <span class="mi">1</span><span class="p">),</span> <span class="p">(</span><span class="mi">3</span><span class="p">,</span> <span class="mi">1</span><span class="p">),</span> <span class="p">(</span><span class="mi">4</span><span class="p">,</span> <span class="mi">2</span><span class="p">),</span> <span class="p">(</span><span class="mi">5</span><span class="p">,</span> <span class="mi">3</span><span class="p">),</span> <span class="p">(</span><span class="mi">7</span><span class="p">,</span> <span class="mi">4</span><span class="p">),</span> <span class="p">(</span><span class="mi">8</span><span class="p">,</span> <span class="mi">5</span><span class="p">)]</span>
+<span class="go"># node 1 is at 0 hops</span>
+<span class="go"># node 2 is at 1 hop</span>
+<span class="go"># ...</span>
+<span class="go"># node 8 is at 5 hops</span>
+</pre></div>
+</div>
+</dd></dl>
+
+</div>
+<div class="section" id="graph-statistics">
+<h2>Graph statistics<a class="headerlink" href="#graph-statistics" title="Permalink to this headline">¶</a></h2>
+<dl class="method">
+<dt id="altgraph.Graph.Graph.connected">
+<tt class="descclassname">Graph.</tt><tt class="descname">connected</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.connected" title="Permalink to this definition">¶</a></dt>
+<dd><p>Returns True iff every node in the graph can be reached from
+every other node.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.Graph.Graph.clust_coef">
+<tt class="descclassname">Graph.</tt><tt class="descname">clust_coef</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.Graph.Graph.clust_coef" title="Permalink to this definition">¶</a></dt>
+<dd><p>Returns the local clustering coefficient of node.</p>
+<p>The local cluster coefficient is the proportion of the actual number
+of edges between neighbours of node and the maximum number of
+edges between those nodes.</p>
+</dd></dl>
+
+</div>
+</div>
+
+
+ </div>
+ </div>
+ </div>
+ <div class="sphinxsidebar">
+ <div class="sphinxsidebarwrapper">
+ <h3><a href="index.html">Table Of Contents</a></h3>
+ <ul>
+<li><a class="reference internal" href="#"><tt class="docutils literal"><span class="pre">altgraph.Graph</span></tt> &#8212; Basic directional graphs</a><ul>
+<li><a class="reference internal" href="#node-related-methods">Node related methods</a></li>
+<li><a class="reference internal" href="#edge-related-methods">Edge related methods</a></li>
+<li><a class="reference internal" href="#graph-traversal">Graph traversal</a></li>
+<li><a class="reference internal" href="#graph-statistics">Graph statistics</a></li>
+</ul>
+</li>
+</ul>
+
+ <h4>Previous topic</h4>
+ <p class="topless"><a href="core.html"
+ title="previous chapter"><tt class="docutils literal"><span class="pre">altgraph</span></tt> &#8212; A Python Graph Library</a></p>
+ <h4>Next topic</h4>
+ <p class="topless"><a href="objectgraph.html"
+ title="next chapter"><tt class="docutils literal"><span class="pre">altgraph.ObjectGraph</span></tt> &#8212; Graphs of objecs with an identifier</a></p>
+<div id="searchbox" style="display: none">
+ <h3>Quick search</h3>
+ <form class="search" action="search.html" method="get">
+ <input type="text" name="q" />
+ <input type="submit" value="Go" />
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+
+ <div class="section" id="module-altgraph.GraphAlgo">
+<span id="altgraph-graphalgo-graph-algorithms"></span><h1><a class="reference internal" href="#module-altgraph.GraphAlgo" title="altgraph.GraphAlgo: Basic graphs algoritms"><tt class="xref py py-mod docutils literal"><span class="pre">altgraph.GraphAlgo</span></tt></a> &#8212; Graph algorithms<a class="headerlink" href="#module-altgraph.GraphAlgo" title="Permalink to this headline">¶</a></h1>
+<dl class="function">
+<dt id="altgraph.GraphAlgo.dijkstra">
+<tt class="descclassname">altgraph.GraphAlgo.</tt><tt class="descname">dijkstra</tt><big>(</big><em>graph</em>, <em>start</em><span class="optional">[</span>, <em>end</em><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.GraphAlgo.dijkstra" title="Permalink to this definition">¶</a></dt>
+<dd><p>Dijkstra&#8217;s algorithm for shortest paths.</p>
+<p>Find shortest paths from the start node to all nodes nearer
+than or equal to the <em>end</em> node. The edge data is assumed to be the edge length.</p>
+<div class="admonition note">
+<p class="first admonition-title">Note</p>
+<p class="last">Dijkstra&#8217;s algorithm is only guaranteed to work correctly when all edge lengths are positive.
+This code does not verify this property for all edges (only the edges examined until the end
+vertex is reached), but will correctly compute shortest paths even for some graphs with negative
+edges, and will raise an exception if it discovers that a negative edge has caused it to make a mistake.</p>
+</div>
+</dd></dl>
+
+<dl class="function">
+<dt id="altgraph.GraphAlgo.shortest_path">
+<tt class="descclassname">altgraph.GraphAlgo.</tt><tt class="descname">shortest_path</tt><big>(</big><em>graph</em>, <em>start</em>, <em>end</em><big>)</big><a class="headerlink" href="#altgraph.GraphAlgo.shortest_path" title="Permalink to this definition">¶</a></dt>
+<dd><p>Find a single shortest path from the given start node to the given end node.
+The input has the same conventions as <a class="reference internal" href="#altgraph.GraphAlgo.dijkstra" title="altgraph.GraphAlgo.dijkstra"><tt class="xref py py-func docutils literal"><span class="pre">dijkstra()</span></tt></a>. The output is a list
+of the nodes in order along the shortest path.</p>
+</dd></dl>
+
+</div>
+
+
+ </div>
+ </div>
+ </div>
+ <div class="sphinxsidebar">
+ <div class="sphinxsidebarwrapper">
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+ title="previous chapter"><tt class="docutils literal"><span class="pre">altgraph.ObjectGraph</span></tt> &#8212; Graphs of objecs with an identifier</a></p>
+ <h4>Next topic</h4>
+ <p class="topless"><a href="graphstat.html"
+ title="next chapter"><tt class="docutils literal"><span class="pre">altgraph.GraphStat</span></tt> &#8212; Functions providing various graph statistics</a></p>
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new file mode 100644
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@@ -0,0 +1,130 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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+
+ <div class="section" id="module-altgraph.GraphStat">
+<span id="altgraph-graphstat-functions-providing-various-graph-statistics"></span><h1><a class="reference internal" href="#module-altgraph.GraphStat" title="altgraph.GraphStat: Functions providing various graph statistics"><tt class="xref py py-mod docutils literal"><span class="pre">altgraph.GraphStat</span></tt></a> &#8212; Functions providing various graph statistics<a class="headerlink" href="#module-altgraph.GraphStat" title="Permalink to this headline">¶</a></h1>
+<p>The module <a class="reference internal" href="#module-altgraph.GraphStat" title="altgraph.GraphStat: Functions providing various graph statistics"><tt class="xref py py-mod docutils literal"><span class="pre">altgraph.GraphStat</span></tt></a> provides function that calculate
+graph statistics. Currently there is only one such function, more may
+be added later.</p>
+<dl class="function">
+<dt id="altgraph.GraphStat.degree_dist">
+<tt class="descclassname">altgraph.GraphStat.</tt><tt class="descname">degree_dist</tt><big>(</big><em>graph</em><span class="optional">[</span>, <em>limits</em><span class="optional">[</span>, <em>bin_num</em><span class="optional">[</span>, <em>mode</em><span class="optional">]</span><span class="optional">]</span><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.GraphStat.degree_dist" title="Permalink to this definition">¶</a></dt>
+<dd><p>Groups the number of edges per node into <em>bin_num</em> bins
+and returns the list of those bins. Every item in the result
+is a tuple with the center of the bin and the number of items
+in that bin.</p>
+<p>When the <em>limits</em> argument is present it must be a tuple with
+the mininum and maximum number of edges that get binned (that
+is, when <em>limits</em> is <tt class="docutils literal"><span class="pre">(4,</span> <span class="pre">10)</span></tt> only nodes with between 4
+and 10 edges get counted.</p>
+<p>The <em>mode</em> argument is used to count incoming (<tt class="docutils literal"><span class="pre">'inc'</span></tt>) or
+outgoing (<tt class="docutils literal"><span class="pre">'out'</span></tt>) edges. The default is to count the outgoing
+edges.</p>
+</dd></dl>
+
+</div>
+
+
+ </div>
+ </div>
+ </div>
+ <div class="sphinxsidebar">
+ <div class="sphinxsidebarwrapper">
+ <h4>Previous topic</h4>
+ <p class="topless"><a href="graphalgo.html"
+ title="previous chapter"><tt class="docutils literal"><span class="pre">altgraph.GraphAlgo</span></tt> &#8212; Graph algorithms</a></p>
+ <h4>Next topic</h4>
+ <p class="topless"><a href="graphutil.html"
+ title="next chapter"><tt class="docutils literal"><span class="pre">altgraph.GraphUtil</span></tt> &#8212; Utility functions</a></p>
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+</html> \ No newline at end of file
diff --git a/python/altgraph/doc/_build/html/graphutil.html b/python/altgraph/doc/_build/html/graphutil.html
new file mode 100644
index 000000000..774efcfdf
--- /dev/null
+++ b/python/altgraph/doc/_build/html/graphutil.html
@@ -0,0 +1,162 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
+
+<html xmlns="http://www.w3.org/1999/xhtml">
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+ <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+
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+ };
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+ <link rel="prev" title="altgraph.GraphStat — Functions providing various graph statistics" href="graphstat.html" />
+ </head>
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+ >modules</a> |</li>
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+ accesskey="N">next</a> |</li>
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+ <div class="body">
+
+ <div class="section" id="module-altgraph.GraphUtil">
+<span id="altgraph-graphutil-utility-functions"></span><h1><a class="reference internal" href="#module-altgraph.GraphUtil" title="altgraph.GraphUtil: Utility functions"><tt class="xref py py-mod docutils literal"><span class="pre">altgraph.GraphUtil</span></tt></a> &#8212; Utility functions<a class="headerlink" href="#module-altgraph.GraphUtil" title="Permalink to this headline">¶</a></h1>
+<p>The module <a class="reference internal" href="#module-altgraph.GraphUtil" title="altgraph.GraphUtil: Utility functions"><tt class="xref py py-mod docutils literal"><span class="pre">altgraph.GraphUtil</span></tt></a> performs a number of more
+or less useful utility functions.</p>
+<dl class="function">
+<dt id="altgraph.GraphUtil.generate_random_graph">
+<tt class="descclassname">altgraph.GraphUtil.</tt><tt class="descname">generate_random_graph</tt><big>(</big><em>node_num, edge_num[, self_loops[, multi_edges]</em><big>)</big><a class="headerlink" href="#altgraph.GraphUtil.generate_random_graph" title="Permalink to this definition">¶</a></dt>
+<dd><p>Generates and returns a <a class="reference internal" href="graph.html#altgraph.Graph.Graph" title="altgraph.Graph.Graph"><tt class="xref py py-class docutils literal"><span class="pre">Graph</span></tt></a> instance
+with <em>node_num</em> nodes randomly connected by <em>edge_num</em> edges.</p>
+<p>When <em>self_loops</em> is present and True there can be edges that point from
+a node to itself.</p>
+<p>When <em>multi_edge</em> is present and True there can be duplicate edges.</p>
+<p>This method raises <tt class="xref py py-class docutils literal"><span class="pre">GraphError</span> <span class="pre">&lt;altgraph.GraphError</span></tt> when
+a graph with the requested configuration cannot be created.</p>
+</dd></dl>
+
+<dl class="function">
+<dt id="altgraph.GraphUtil.generate_scale_free_graph">
+<tt class="descclassname">altgraph.GraphUtil.</tt><tt class="descname">generate_scale_free_graph</tt><big>(</big><em>steps</em>, <em>growth_num</em><span class="optional">[</span>, <em>self_loops</em><span class="optional">[</span>, <em>multi_edges</em><span class="optional">]</span><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.GraphUtil.generate_scale_free_graph" title="Permalink to this definition">¶</a></dt>
+<dd><p>Generates and returns a <a class="reference internal" href="graph.html#altgraph.Graph.Graph" title="altgraph.Graph.Graph"><tt class="xref py py-class docutils literal"><span class="pre">Graph</span></tt></a> instance that
+will have <em>steps*growth_n um</em> nodes and a scale free (powerlaw)
+connectivity.</p>
+<p>Starting with a fully connected graph with <em>growth_num</em> nodes
+at every step <em>growth_num</em> nodes are added to the graph and are connected
+to existing nodes with a probability proportional to the degree of these
+existing nodes.</p>
+<div class="admonition warning">
+<p class="first admonition-title">Warning</p>
+<p class="last">The current implementation is basically untested, although
+code inspection seems to indicate an implementation that is consistent
+with the description at
+<a class="reference external" href="http://mathworld.wolfram.com/Scale-FreeNetwork.html">Wolfram MathWorld</a></p>
+</div>
+</dd></dl>
+
+<dl class="function">
+<dt id="altgraph.GraphUtil.filter_stack">
+<tt class="descclassname">altgraph.GraphUtil.</tt><tt class="descname">filter_stack</tt><big>(</big><em>graph</em>, <em>head</em>, <em>filters</em><big>)</big><a class="headerlink" href="#altgraph.GraphUtil.filter_stack" title="Permalink to this definition">¶</a></dt>
+<dd><p>Perform a depth-first oder walk of the graph starting at <em>head</em> and
+apply all filter functions in <em>filters</em> on the node data of the nodes
+found.</p>
+<p>Returns (<em>visited</em>, <em>removes</em>, <em>orphans</em>), where</p>
+<ul class="simple">
+<li><em>visited</em>: the set of visited nodes</li>
+<li><em>removes</em>: the list of nodes where the node data doesn&#8217;t match
+all <em>filters</em>.</li>
+<li><em>orphans</em>: list of tuples (<em>last_good</em>, <em>node</em>), where
+node is not in <em>removes</em> and one of the nodes that is connected
+by an incoming edge is in <em>removes</em>. <em>Last_good</em> is the
+closest upstream node that is not in <em>removes</em>.</li>
+</ul>
+</dd></dl>
+
+</div>
+
+
+ </div>
+ </div>
+ </div>
+ <div class="sphinxsidebar">
+ <div class="sphinxsidebarwrapper">
+ <h4>Previous topic</h4>
+ <p class="topless"><a href="graphstat.html"
+ title="previous chapter"><tt class="docutils literal"><span class="pre">altgraph.GraphStat</span></tt> &#8212; Functions providing various graph statistics</a></p>
+ <h4>Next topic</h4>
+ <p class="topless"><a href="dot.html"
+ title="next chapter"><tt class="docutils literal"><span class="pre">altgraph.Dot</span></tt> &#8212; Interface to the dot language</a></p>
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+ >previous</a> |</li>
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+ Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.1.
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+</html> \ No newline at end of file
diff --git a/python/altgraph/doc/_build/html/index.html b/python/altgraph/doc/_build/html/index.html
new file mode 100644
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@@ -0,0 +1,142 @@
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+ accesskey="I">index</a></li>
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+ <div class="section" id="altgraph-a-basic-graph-library">
+<h1>Altgraph - A basic graph library<a class="headerlink" href="#altgraph-a-basic-graph-library" title="Permalink to this headline">¶</a></h1>
+<p>altgraph is a fork of graphlib: a graph (network) package for constructing
+graphs, BFS and DFS traversals, topological sort, shortest paths, etc. with
+graphviz output.</p>
+<p>The primary users of this package are <a class="reference external" href="http://pypi.python.org/pypi/macholib">macholib</a> and <a class="reference external" href="http://pypi.python.org/pypi/modulegraph">modulegraph</a>.</p>
+<div class="toctree-wrapper compound">
+<ul>
+<li class="toctree-l1"><a class="reference internal" href="changelog.html">Release history</a></li>
+<li class="toctree-l1"><a class="reference internal" href="license.html">License</a></li>
+<li class="toctree-l1"><a class="reference internal" href="core.html"><tt class="docutils literal"><span class="pre">altgraph</span></tt> &#8212; A Python Graph Library</a></li>
+<li class="toctree-l1"><a class="reference internal" href="graph.html"><tt class="docutils literal"><span class="pre">altgraph.Graph</span></tt> &#8212; Basic directional graphs</a></li>
+<li class="toctree-l1"><a class="reference internal" href="objectgraph.html"><tt class="docutils literal"><span class="pre">altgraph.ObjectGraph</span></tt> &#8212; Graphs of objecs with an identifier</a></li>
+<li class="toctree-l1"><a class="reference internal" href="graphalgo.html"><tt class="docutils literal"><span class="pre">altgraph.GraphAlgo</span></tt> &#8212; Graph algorithms</a></li>
+<li class="toctree-l1"><a class="reference internal" href="graphstat.html"><tt class="docutils literal"><span class="pre">altgraph.GraphStat</span></tt> &#8212; Functions providing various graph statistics</a></li>
+<li class="toctree-l1"><a class="reference internal" href="graphutil.html"><tt class="docutils literal"><span class="pre">altgraph.GraphUtil</span></tt> &#8212; Utility functions</a></li>
+<li class="toctree-l1"><a class="reference internal" href="dot.html"><tt class="docutils literal"><span class="pre">altgraph.Dot</span></tt> &#8212; Interface to the dot language</a></li>
+</ul>
+</div>
+<div class="section" id="online-resources">
+<h2>Online Resources<a class="headerlink" href="#online-resources" title="Permalink to this headline">¶</a></h2>
+<ul class="simple">
+<li><a class="reference external" href="http://bitbucket.org/ronaldoussoren/altgraph/">Sourcecode repository on bitbucket</a></li>
+<li><a class="reference external" href="http://bitbucket.org/ronaldoussoren/altgraph/issues">The issue tracker</a></li>
+</ul>
+</div>
+<div class="section" id="indices-and-tables">
+<h2>Indices and tables<a class="headerlink" href="#indices-and-tables" title="Permalink to this headline">¶</a></h2>
+<ul class="simple">
+<li><a class="reference internal" href="genindex.html"><em>Index</em></a></li>
+<li><a class="reference internal" href="py-modindex.html"><em>Module Index</em></a></li>
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+<li><a class="reference internal" href="#">Altgraph - A basic graph library</a><ul>
+<li><a class="reference internal" href="#online-resources">Online Resources</a></li>
+<li><a class="reference internal" href="#indices-and-tables">Indices and tables</a></li>
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diff --git a/python/altgraph/doc/_build/html/license.html b/python/altgraph/doc/_build/html/license.html
new file mode 100644
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@@ -0,0 +1,136 @@
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+ <div class="section" id="license">
+<h1>License<a class="headerlink" href="#license" title="Permalink to this headline">¶</a></h1>
+<p>Copyright (c) 2004 Istvan Albert unless otherwise noted.</p>
+<p>Parts are copyright (c) Bob Ippolito</p>
+<p>Parts are copyright (c) 2010-2014 Ronald Oussoren</p>
+<div class="section" id="mit-license">
+<h2>MIT License<a class="headerlink" href="#mit-license" title="Permalink to this headline">¶</a></h2>
+<p>Permission is hereby granted, free of charge, to any person obtaining a copy of this software
+and associated documentation files (the &#8220;Software&#8221;), to deal in the Software without restriction,
+including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense,
+and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do
+so.</p>
+<p>THE SOFTWARE IS PROVIDED &#8220;AS IS&#8221;, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED,
+INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR
+PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE
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+ <div class="sphinxsidebar">
+ <div class="sphinxsidebarwrapper">
+ <h3><a href="index.html">Table Of Contents</a></h3>
+ <ul>
+<li><a class="reference internal" href="#">License</a><ul>
+<li><a class="reference internal" href="#mit-license">MIT License</a></li>
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+</html> \ No newline at end of file
diff --git a/python/altgraph/doc/_build/html/objectgraph.html b/python/altgraph/doc/_build/html/objectgraph.html
new file mode 100644
index 000000000..c9879f656
--- /dev/null
+++ b/python/altgraph/doc/_build/html/objectgraph.html
@@ -0,0 +1,283 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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+ <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+
+ <title>altgraph.ObjectGraph — Graphs of objecs with an identifier &mdash; altgraph 0.11 documentation</title>
+
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+
+ <div class="section" id="module-altgraph.ObjectGraph">
+<span id="altgraph-objectgraph-graphs-of-objecs-with-an-identifier"></span><h1><a class="reference internal" href="#module-altgraph.ObjectGraph" title="altgraph.ObjectGraph: A graph of objects that have a &quot;graphident&quot; attribute."><tt class="xref py py-mod docutils literal"><span class="pre">altgraph.ObjectGraph</span></tt></a> &#8212; Graphs of objecs with an identifier<a class="headerlink" href="#module-altgraph.ObjectGraph" title="Permalink to this headline">¶</a></h1>
+<dl class="class">
+<dt id="altgraph.ObjectGraph.ObjectGraph">
+<em class="property">class </em><tt class="descclassname">altgraph.ObjectGraph.</tt><tt class="descname">ObjectGraph</tt><big>(</big><span class="optional">[</span><em>graph</em><span class="optional">[</span>, <em>debug</em><span class="optional">]</span><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph" title="Permalink to this definition">¶</a></dt>
+<dd><p>A graph of objects that have a &#8220;graphident&#8221; attribute. The
+value of this attribute is the key for the object in the
+graph.</p>
+<p>The optional <em>graph</em> is a previously constructed
+<a class="reference internal" href="graph.html#altgraph.Graph.Graph" title="altgraph.Graph.Graph"><tt class="xref py py-class docutils literal"><span class="pre">Graph</span></tt></a>.</p>
+<p>The optional <em>debug</em> level controls the amount of debug output
+(see <a class="reference internal" href="#altgraph.ObjectGraph.ObjectGraph.msg" title="altgraph.ObjectGraph.ObjectGraph.msg"><tt class="xref py py-meth docutils literal"><span class="pre">msg()</span></tt></a>, <a class="reference internal" href="#altgraph.ObjectGraph.ObjectGraph.msgin" title="altgraph.ObjectGraph.ObjectGraph.msgin"><tt class="xref py py-meth docutils literal"><span class="pre">msgin()</span></tt></a> and <a class="reference internal" href="#altgraph.ObjectGraph.ObjectGraph.msgout" title="altgraph.ObjectGraph.ObjectGraph.msgout"><tt class="xref py py-meth docutils literal"><span class="pre">msgout()</span></tt></a>).</p>
+<div class="admonition note">
+<p class="first admonition-title">Note</p>
+<p class="last">the altgraph library does not generate output, the
+debug attribute and message methods are present for use
+by subclasses.</p>
+</div>
+</dd></dl>
+
+<dl class="data">
+<dt id="altgraph.ObjectGraph.ObjectGraph.graph">
+<tt class="descclassname">ObjectGraph.</tt><tt class="descname">graph</tt><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph.graph" title="Permalink to this definition">¶</a></dt>
+<dd><p>An <a class="reference internal" href="graph.html#altgraph.Graph.Graph" title="altgraph.Graph.Graph"><tt class="xref py py-class docutils literal"><span class="pre">Graph</span></tt></a> object that contains
+the graph data.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.ObjectGraph.ObjectGraph.addNode">
+<tt class="descclassname">ObjectGraph.</tt><tt class="descname">addNode</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph.addNode" title="Permalink to this definition">¶</a></dt>
+<dd><p>Adds a <em>node</em> to the graph.</p>
+<div class="admonition note">
+<p class="first admonition-title">Note</p>
+<p class="last">re-adding a node that was previously removed
+using <a class="reference internal" href="#altgraph.ObjectGraph.ObjectGraph.removeNode" title="altgraph.ObjectGraph.ObjectGraph.removeNode"><tt class="xref py py-meth docutils literal"><span class="pre">removeNode()</span></tt></a> will reinstate the previously
+removed node.</p>
+</div>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.ObjectGraph.ObjectGraph.createNode">
+<tt class="descclassname">ObjectGraph.</tt><tt class="descname">createNode</tt><big>(</big><em>self</em>, <em>cls</em>, <em>name</em>, <em>*args</em>, <em>**kwds</em><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph.createNode" title="Permalink to this definition">¶</a></dt>
+<dd><p>Creates a new node using <tt class="docutils literal"><span class="pre">cls(*args,</span> <span class="pre">**kwds)</span></tt> and adds that
+node using <a class="reference internal" href="#altgraph.ObjectGraph.ObjectGraph.addNode" title="altgraph.ObjectGraph.ObjectGraph.addNode"><tt class="xref py py-meth docutils literal"><span class="pre">addNode()</span></tt></a>.</p>
+<p>Returns the newly created node.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.ObjectGraph.ObjectGraph.removeNode">
+<tt class="descclassname">ObjectGraph.</tt><tt class="descname">removeNode</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph.removeNode" title="Permalink to this definition">¶</a></dt>
+<dd><p>Removes a <em>node</em> from the graph when it exists. The <em>node</em> argument
+is either a node object, or the graphident of a node.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.ObjectGraph.ObjectGraph.createReferences">
+<tt class="descclassname">ObjectGraph.</tt><tt class="descname">createReferences</tt><big>(</big><em>fromnode</em>, <em>tonode</em><span class="optional">[</span>, <em>edge_data</em><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph.createReferences" title="Permalink to this definition">¶</a></dt>
+<dd><p>Creates a reference from <em>fromnode</em> to <em>tonode</em>. The optional
+<em>edge_data</em> is associated with the edge.</p>
+<p><em>Fromnode</em> and <em>tonode</em> can either be node objects or the graphident
+values for nodes.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.ObjectGraph.removeReference">
+<tt class="descclassname">altgraph.ObjectGraph.</tt><tt class="descname">removeReference</tt><big>(</big><em>fromnode</em>, <em>tonode</em><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.removeReference" title="Permalink to this definition">¶</a></dt>
+<dd><p>Removes the reference from <em>fromnode</em> to <em>tonode</em> if it exists.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.ObjectGraph.ObjectGraph.getRawIdent">
+<tt class="descclassname">ObjectGraph.</tt><tt class="descname">getRawIdent</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph.getRawIdent" title="Permalink to this definition">¶</a></dt>
+<dd><p>Returns the <em>graphident</em> attribute of <em>node</em>, or the graph itself
+when <em>node</em> is <a class="reference external" href="http://docs.python.org/library/constants.html#None" title="(in Python v2.7)"><tt class="xref py py-data docutils literal"><span class="pre">None</span></tt></a>.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.ObjectGraph.getIdent">
+<tt class="descclassname">altgraph.ObjectGraph.</tt><tt class="descname">getIdent</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.getIdent" title="Permalink to this definition">¶</a></dt>
+<dd><p>Same as <tt class="xref py py-meth docutils literal"><span class="pre">getRawIdent()</span></tt>, but only if the node is part
+of the graph.</p>
+<p><em>Node</em> can either be an actual node object or the graphident of
+a node.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.ObjectGraph.ObjectGraph.findNode">
+<tt class="descclassname">ObjectGraph.</tt><tt class="descname">findNode</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph.findNode" title="Permalink to this definition">¶</a></dt>
+<dd><p>Returns a given node in the graph, or <tt class="xref py py-data docutils literal"><span class="pre">Node</span></tt> when it cannot
+be found.</p>
+<p><em>Node</em> is either an object with a <em>graphident</em> attribute or
+the <em>graphident</em> attribute itself.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.ObjectGraph.ObjectGraph.__contains__">
+<tt class="descclassname">ObjectGraph.</tt><tt class="descname">__contains__</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph.__contains__" title="Permalink to this definition">¶</a></dt>
+<dd><p>Returns True if <em>node</em> is a member of the graph. <em>Node</em> is either an
+object with a <em>graphident</em> attribute or the <em>graphident</em> attribute itself.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.ObjectGraph.ObjectGraph.flatten">
+<tt class="descclassname">ObjectGraph.</tt><tt class="descname">flatten</tt><big>(</big><span class="optional">[</span><em>condition</em><span class="optional">[</span>, <em>start</em><span class="optional">]</span><span class="optional">]</span><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph.flatten" title="Permalink to this definition">¶</a></dt>
+<dd><p>Yield all nodes that are entirely reachable by <em>condition</em>
+starting fromt he given <em>start</em> node or the graph root.</p>
+<div class="admonition note">
+<p class="first admonition-title">Note</p>
+<p class="last">objects are only reachable from the graph root
+when there is a reference from the root to the node
+(either directly or through another node)</p>
+</div>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.ObjectGraph.ObjectGraph.nodes">
+<tt class="descclassname">ObjectGraph.</tt><tt class="descname">nodes</tt><big>(</big><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph.nodes" title="Permalink to this definition">¶</a></dt>
+<dd><p>Yield all nodes in the graph.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.ObjectGraph.ObjectGraph.get_edges">
+<tt class="descclassname">ObjectGraph.</tt><tt class="descname">get_edges</tt><big>(</big><em>node</em><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph.get_edges" title="Permalink to this definition">¶</a></dt>
+<dd><p>Returns two iterators that yield the nodes reaching by
+outgoing and incoming edges.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.ObjectGraph.ObjectGraph.filterStack">
+<tt class="descclassname">ObjectGraph.</tt><tt class="descname">filterStack</tt><big>(</big><em>filters</em><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph.filterStack" title="Permalink to this definition">¶</a></dt>
+<dd><p>Filter the ObjectGraph in-place by removing all edges to nodes that
+do not match every filter in the given filter list</p>
+<p>Returns a tuple containing the number of:
+(<em>nodes_visited</em>, <em>nodes_removed</em>, <em>nodes_orphaned</em>)</p>
+</dd></dl>
+
+<div class="section" id="debug-output">
+<h2>Debug output<a class="headerlink" href="#debug-output" title="Permalink to this headline">¶</a></h2>
+<dl class="data">
+<dt id="altgraph.ObjectGraph.ObjectGraph.debug">
+<tt class="descclassname">ObjectGraph.</tt><tt class="descname">debug</tt><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph.debug" title="Permalink to this definition">¶</a></dt>
+<dd><p>The current debug level.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.ObjectGraph.ObjectGraph.msg">
+<tt class="descclassname">ObjectGraph.</tt><tt class="descname">msg</tt><big>(</big><em>level</em>, <em>text</em>, <em>*args</em><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph.msg" title="Permalink to this definition">¶</a></dt>
+<dd><p>Print a debug message at the current indentation level when the current
+debug level is <em>level</em> or less.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.ObjectGraph.ObjectGraph.msgin">
+<tt class="descclassname">ObjectGraph.</tt><tt class="descname">msgin</tt><big>(</big><em>level</em>, <em>text</em>, <em>*args</em><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph.msgin" title="Permalink to this definition">¶</a></dt>
+<dd><p>Print a debug message when the current debug level is <em>level</em> or less,
+and increase the indentation level.</p>
+</dd></dl>
+
+<dl class="method">
+<dt id="altgraph.ObjectGraph.ObjectGraph.msgout">
+<tt class="descclassname">ObjectGraph.</tt><tt class="descname">msgout</tt><big>(</big><em>level</em>, <em>text</em>, <em>*args</em><big>)</big><a class="headerlink" href="#altgraph.ObjectGraph.ObjectGraph.msgout" title="Permalink to this definition">¶</a></dt>
+<dd><p>Decrease the indentation level and print a debug message when the
+current debug level is <em>level</em> or less.</p>
+</dd></dl>
+
+</div>
+</div>
+
+
+ </div>
+ </div>
+ </div>
+ <div class="sphinxsidebar">
+ <div class="sphinxsidebarwrapper">
+ <h3><a href="index.html">Table Of Contents</a></h3>
+ <ul>
+<li><a class="reference internal" href="#"><tt class="docutils literal"><span class="pre">altgraph.ObjectGraph</span></tt> &#8212; Graphs of objecs with an identifier</a><ul>
+<li><a class="reference internal" href="#debug-output">Debug output</a></li>
+</ul>
+</li>
+</ul>
+
+ <h4>Previous topic</h4>
+ <p class="topless"><a href="graph.html"
+ title="previous chapter"><tt class="docutils literal"><span class="pre">altgraph.Graph</span></tt> &#8212; Basic directional graphs</a></p>
+ <h4>Next topic</h4>
+ <p class="topless"><a href="graphalgo.html"
+ title="next chapter"><tt class="docutils literal"><span class="pre">altgraph.GraphAlgo</span></tt> &#8212; Graph algorithms</a></p>
+<div id="searchbox" style="display: none">
+ <h3>Quick search</h3>
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diff --git a/python/altgraph/doc/_build/html/objects.inv b/python/altgraph/doc/_build/html/objects.inv
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diff --git a/python/altgraph/doc/_build/html/py-modindex.html b/python/altgraph/doc/_build/html/py-modindex.html
new file mode 100644
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+
+
+ <h1>Python Module Index</h1>
+
+ <div class="modindex-jumpbox">
+ <a href="#cap-a"><strong>a</strong></a>
+ </div>
+
+ <table class="indextable modindextable" cellspacing="0" cellpadding="2">
+ <tr class="pcap"><td></td><td>&nbsp;</td><td></td></tr>
+ <tr class="cap" id="cap-a"><td></td><td>
+ <strong>a</strong></td><td></td></tr>
+ <tr>
+ <td><img src="_static/minus.png" class="toggler"
+ id="toggle-1" style="display: none" alt="-" /></td>
+ <td>
+ <a href="core.html#module-altgraph"><tt class="xref">altgraph</tt></a></td><td>
+ <em>A directional graph for python</em></td></tr>
+ <tr class="cg-1">
+ <td></td>
+ <td>&nbsp;&nbsp;&nbsp;
+ <a href="dot.html#module-altgraph.Dot"><tt class="xref">altgraph.Dot</tt></a></td><td>
+ <em>Interface to the dot language as used by Graphviz..</em></td></tr>
+ <tr class="cg-1">
+ <td></td>
+ <td>&nbsp;&nbsp;&nbsp;
+ <a href="graph.html#module-altgraph.Graph"><tt class="xref">altgraph.Graph</tt></a></td><td>
+ <em>Basic directional graphs.</em></td></tr>
+ <tr class="cg-1">
+ <td></td>
+ <td>&nbsp;&nbsp;&nbsp;
+ <a href="graphalgo.html#module-altgraph.GraphAlgo"><tt class="xref">altgraph.GraphAlgo</tt></a></td><td>
+ <em>Basic graphs algoritms</em></td></tr>
+ <tr class="cg-1">
+ <td></td>
+ <td>&nbsp;&nbsp;&nbsp;
+ <a href="graphstat.html#module-altgraph.GraphStat"><tt class="xref">altgraph.GraphStat</tt></a></td><td>
+ <em>Functions providing various graph statistics</em></td></tr>
+ <tr class="cg-1">
+ <td></td>
+ <td>&nbsp;&nbsp;&nbsp;
+ <a href="graphutil.html#module-altgraph.GraphUtil"><tt class="xref">altgraph.GraphUtil</tt></a></td><td>
+ <em>Utility functions</em></td></tr>
+ <tr class="cg-1">
+ <td></td>
+ <td>&nbsp;&nbsp;&nbsp;
+ <a href="objectgraph.html#module-altgraph.ObjectGraph"><tt class="xref">altgraph.ObjectGraph</tt></a></td><td>
+ <em>A graph of objects that have a &#34;graphident&#34; attribute.</em></td></tr>
+ </table>
+
+
+ </div>
+ </div>
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new file mode 100644
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+++ b/python/altgraph/doc/_build/html/searchindex.js
@@ -0,0 +1 @@
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