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authorMatt A. Tobin <mattatobin@localhost.localdomain>2018-02-02 04:16:08 -0500
committerMatt A. Tobin <mattatobin@localhost.localdomain>2018-02-02 04:16:08 -0500
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tree10027f336435511475e392454359edea8e25895d /python/altgraph/altgraph_tests/test_graphutil.py
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Add m-esr52 at 52.6.0
Diffstat (limited to 'python/altgraph/altgraph_tests/test_graphutil.py')
-rw-r--r--python/altgraph/altgraph_tests/test_graphutil.py140
1 files changed, 140 insertions, 0 deletions
diff --git a/python/altgraph/altgraph_tests/test_graphutil.py b/python/altgraph/altgraph_tests/test_graphutil.py
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index 000000000..c1166237c
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+++ b/python/altgraph/altgraph_tests/test_graphutil.py
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+import unittest
+from altgraph import GraphUtil
+from altgraph import Graph, GraphError
+
+class TestGraphUtil (unittest.TestCase):
+
+ def test_generate_random(self):
+ g = GraphUtil.generate_random_graph(10, 50)
+ self.assertEqual(g.number_of_nodes(), 10)
+ self.assertEqual(g.number_of_edges(), 50)
+
+ seen = set()
+
+ for e in g.edge_list():
+ h, t = g.edge_by_id(e)
+ self.assertFalse(h == t)
+ self.assertTrue((h, t) not in seen)
+ seen.add((h, t))
+
+ g = GraphUtil.generate_random_graph(5, 30, multi_edges=True)
+ self.assertEqual(g.number_of_nodes(), 5)
+ self.assertEqual(g.number_of_edges(), 30)
+
+ seen = set()
+
+ for e in g.edge_list():
+ h, t = g.edge_by_id(e)
+ self.assertFalse(h == t)
+ if (h, t) in seen:
+ break
+ seen.add((h, t))
+
+ else:
+ self.fail("no duplicates?")
+
+ g = GraphUtil.generate_random_graph(5, 21, self_loops=True)
+ self.assertEqual(g.number_of_nodes(), 5)
+ self.assertEqual(g.number_of_edges(), 21)
+
+ seen = set()
+
+ for e in g.edge_list():
+ h, t = g.edge_by_id(e)
+ self.assertFalse((h, t) in seen)
+ if h == t:
+ break
+ seen.add((h, t))
+
+ else:
+ self.fail("no self loops?")
+
+ self.assertRaises(GraphError, GraphUtil.generate_random_graph, 5, 21)
+ g = GraphUtil.generate_random_graph(5, 21, True)
+ self.assertRaises(GraphError, GraphUtil.generate_random_graph, 5, 26, True)
+
+ def test_generate_scale_free(self):
+ graph = GraphUtil.generate_scale_free_graph(50, 10)
+ self.assertEqual(graph.number_of_nodes(), 500)
+
+ counts = {}
+ for node in graph:
+ degree = graph.inc_degree(node)
+ try:
+ counts[degree] += 1
+ except KeyError:
+ counts[degree] = 1
+
+ total_counts = sum(counts.values())
+ P = {}
+ for degree, count in counts.items():
+ P[degree] = count * 1.0 / total_counts
+
+ # XXX: use algoritm <http://stackoverflow.com/questions/3433486/how-to-do-exponential-and-logarithmic-curve-fitting-in-python-i-found-only-polyn>
+ # to check if P[degree] ~ degree ** G (for some G)
+
+ #print sorted(P.items())
+
+ #print sorted([(count, degree) for degree, count in counts.items()])
+
+ #self.fail("missing tests for GraphUtil.generate_scale_free_graph")
+
+ def test_filter_stack(self):
+ g = Graph.Graph()
+ g.add_node("1", "N.1")
+ g.add_node("1.1", "N.1.1")
+ g.add_node("1.1.1", "N.1.1.1")
+ g.add_node("1.1.2", "N.1.1.2")
+ g.add_node("1.1.3", "N.1.1.3")
+ g.add_node("1.1.1.1", "N.1.1.1.1")
+ g.add_node("1.1.1.2", "N.1.1.1.2")
+ g.add_node("1.1.2.1", "N.1.1.2.1")
+ g.add_node("1.1.2.2", "N.1.1.2.2")
+ g.add_node("1.1.2.3", "N.1.1.2.3")
+ g.add_node("2", "N.2")
+
+ g.add_edge("1", "1.1")
+ g.add_edge("1.1", "1.1.1")
+ g.add_edge("1.1", "1.1.2")
+ g.add_edge("1.1", "1.1.3")
+ g.add_edge("1.1.1", "1.1.1.1")
+ g.add_edge("1.1.1", "1.1.1.2")
+ g.add_edge("1.1.2", "1.1.2.1")
+ g.add_edge("1.1.2", "1.1.2.2")
+ g.add_edge("1.1.2", "1.1.2.3")
+
+ v, r, o = GraphUtil.filter_stack(g, "1", [
+ lambda n: n != "N.1.1.1", lambda n: n != "N.1.1.2.3" ])
+
+ self.assertEqual(v,
+ set(["1", "1.1", "1.1.1", "1.1.2", "1.1.3",
+ "1.1.1.1", "1.1.1.2", "1.1.2.1", "1.1.2.2",
+ "1.1.2.3"]))
+ self.assertEqual(r, set([
+ "1.1.1", "1.1.2.3"]))
+
+ o.sort()
+ self.assertEqual(o,
+ [
+ ("1.1", "1.1.1.1"),
+ ("1.1", "1.1.1.2")
+ ])
+
+ v, r, o = GraphUtil.filter_stack(g, "1", [
+ lambda n: n != "N.1.1.1", lambda n: n != "N.1.1.1.2" ])
+
+ self.assertEqual(v,
+ set(["1", "1.1", "1.1.1", "1.1.2", "1.1.3",
+ "1.1.1.1", "1.1.1.2", "1.1.2.1", "1.1.2.2",
+ "1.1.2.3"]))
+ self.assertEqual(r, set([
+ "1.1.1", "1.1.1.2"]))
+
+ self.assertEqual(o,
+ [
+ ("1.1", "1.1.1.1"),
+ ])
+
+
+if __name__ == "__main__": # pragma: no cover
+ unittest.main()